PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj2g3v1803070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | BES1 | ||||||||
Protein Properties | Length: 225aa MW: 24002.7 Da PI: 6.3492 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 28.9 | 3.9e-09 | 2 | 55 | 89 | 145 |
DUF822 89 spesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlsl 145 s +ss+q s++ss+++spv+sy+asp+sssfpsp+++d +++ llp++++ ++ Lj2g3v1803070.1 2 SACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRMDASPSS---FLLPFIRNITS 55 789***********************************99874...67777777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 6.9E-6 | 1 | 40 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MSACSSIQPS PQSSSFPSPV PSYHASPTSS SFPSPTRMDA SPSSFLLPFI RNITSIPTNL 60 PPLRISNSAP VPPPLSSPRS SKRKADFEPF SNGSFNAFRH PLFATSAPSS PSRRHHVATS 120 TIPECDESDA STVDSGRWVS FQTTPASAAA APPSPTFNLV KPAIQMITPQ SSMDMNEGLP 180 WGSGAEIGRG SDFDFENGRV KPWEGERIHE VGMEELELTL GCGKA |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Lja.3378 | 0.0 | cell culture| pod| protoplast| root |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj2g3v1803070.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT141002 | 1e-161 | BT141002.1 Lotus japonicus clone JCVI-FLLj-10N24 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016185891.1 | 1e-122 | BES1/BZR1 homolog protein 2-like | ||||
Refseq | XP_025636219.1 | 1e-122 | BES1/BZR1 homolog protein 2-like | ||||
Swissprot | Q94A43 | 5e-66 | BEH2_ARATH; BES1/BZR1 homolog protein 2 | ||||
TrEMBL | A0A445BPQ5 | 1e-102 | A0A445BPQ5_ARAHY; Uncharacterized protein | ||||
STRING | AES94892 | 1e-101 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1275 | 34 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75080.2 | 2e-41 | BES1 family protein |