PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj2g3v1068730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | ERF | ||||||||
Protein Properties | Length: 415aa MW: 46704.8 Da PI: 4.4838 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.9 | 5.8e-19 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g Lj2g3v1068730.1 42 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 91 789******.7*********33....35**********************99998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 5.98E-32 | 41 | 98 | No hit | No description |
SMART | SM00380 | 2.0E-35 | 42 | 105 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.559 | 42 | 99 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.2E-27 | 42 | 98 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.05E-19 | 42 | 99 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.0E-13 | 42 | 91 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.1E-8 | 43 | 54 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.1E-8 | 65 | 81 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 415 aa Download sequence Send to blast |
MARKRKVSEV VDERNLSEGT MAWDEMLKQA AELGGARKTR KRFVGVRQRP SGRWVAEIKD 60 TIQKIRVWLG TFDTAEEAAR AYDEAACLLR GANTRTNFWP CSQSSSTPAL SSKITNLLLQ 120 RLKERNNSFS SSSSMSLPTN LQQMQQVDAY GAGSSTQFSI DQFTDFLNDP EPEDYSSSNH 180 TFTKNSAEID YIASGFESCL TEKDSFKGVE MDMEYKSSNV TQTSSNDSNS GVEREEESEE 240 ESVQGTNLDV PDFRFLDTVP PPSYYSPFEI AEGMEEPAEE AENYADEPSM LRAVMKRMKY 300 ERKFSASLYA FNGIPECLKF TLESGNMKGK GLMADQLASL QTACRKSKLE KKNVEEKEYM 360 MAARDNGKEE ENHHQTSIYM DSSSSSSVDE ELLLWNSLDL SPICFVNLLE NGSFN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj2g3v1068730.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003543860.1 | 0.0 | ethylene-responsive transcription factor ERN2 | ||||
Refseq | XP_028197038.1 | 0.0 | ethylene-responsive transcription factor ERN2-like | ||||
TrEMBL | A0A445HBW0 | 0.0 | A0A445HBW0_GLYSO; Ethylene-responsive transcription factor ERN1 | ||||
TrEMBL | K7LXI9 | 0.0 | K7LXI9_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA13G05690.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3338 | 32 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-23 | related to AP2 11 |