PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj2g3v0921510.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 380aa    MW: 42986.6 Da    PI: 4.9318
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj2g3v0921510.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.32e-29561982128
              NAM   2 ppGfrFhPtdeelvveyLkkk.vegkk...leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 
                      p+G++F+P+d el+ e+L++k + g++   + ++e+i++++    i++++P++Lp  ++++ ++++fF ++ ++yatg+rk+r+          
  Lj2g3v0921510.1  56 PAGVKFDPSDVELL-EHLAAKhCIGDRvahMFIHEFIPTLEgdqgICYTHPENLP-GARKDGSSVHFFNRTVNAYATGQRKRRKihhqhglthE 147
                      89************.666666155555665333334554423345**********.556678899******************86888888655 PP

              NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      ++ +W++tgk+k+v++ +g ++g kk++v+y  +++++k+ k++Wvmh+y+l
  Lj2g3v0921510.1 148 EHVRWHKTGKTKPVIE-DGVHKGFKKIMVLYvsSQKRSKPYKSNWVMHQYHL 198
                      5899************.999***********7666778888*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-3540217IPR003441NAC domain
PROSITE profilePS5100529.12155217IPR003441NAC domain
PfamPF023655.9E-1256198IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MARSWIIDFG SFAKKVKNTN LSTVDQIKDC GAYLDCPKCH YRIDNSDVFP EWPGFPAGVK  60
FDPSDVELLE HLAAKHCIGD RVAHMFIHEF IPTLEGDQGI CYTHPENLPG ARKDGSSVHF  120
FNRTVNAYAT GQRKRRKIHH QHGLTHEEHV RWHKTGKTKP VIEDGVHKGF KKIMVLYVSS  180
QKRSKPYKSN WVMHQYHLGS EEEEKDGEYV VSKVFYQPNK HTEKNEENPV AEGSDMASRT  240
DPRTPNPNPP SRPHTDIYVD CDDNFDDSEL PLLIQDDECV PQESHAPPSD VKNEDNMGDS  300
AWLAGESQDV SYFDDLDDIV LCQEMLDSSG LFNDSVLNSS TFNGFTGHAN EGQLGISIQD  360
TLELDTLLDF DFSVSTNLPF
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj2g3v0921510.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027358752.10.0SUPPRESSOR OF GAMMA RESPONSE 1-like
TrEMBLA0A371EAK70.0A0A371EAK7_MUCPR; Supressor of Gamma Response 1 (Fragment)
STRINGGLYMA05G09110.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.18e-90NAC domain containing protein 44