PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj1g3v4141650.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 461aa    MW: 50987.1 Da    PI: 9.2857
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj1g3v4141650.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.39.2e-10175216445
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                       k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Lj1g3v4141650.1 175 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 216
                      6889*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-8167219No hitNo description
SMARTSM003383.2E-8172235IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415174218IPR004827Basic-leucine zipper domain
CDDcd147082.48E-22176228No hitNo description
PfamPF001707.7E-7176216IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-7176219No hitNo description
PROSITE patternPS000360179194IPR004827Basic-leucine zipper domain
PfamPF141441.4E-28258333IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MGSRSRTVNA NNTEDSNKVV NRMPSYAPPP LPSTSSSMGI EATNVHPSRI SEFGALEQSL  60
GFRIEDTMNL SRNPVFNQMK SNSQALGADI QFGALSKSIA TSDNNLSAAI AGSQMMPLQK  120
DSQPNLASTS GGHRENWGES NTGDASPTST DDTDDKNQMV ERGESSDRSK DKTDQKTLRR  180
LAQNREAARK SRLRKKAYVQ QLESSRLKLT QLEQELQRAR QQGIFISSTG EQAHSMSGNG  240
AIAFDVEYAR WLEEHNRHTN ELRAAINSHA GDIELRTIVD NFMTQFDDLF RLKGIAAKAD  300
VFHILSGMWK TPAERCFMWI GGFRFSEILK LLVNQLAPLT EQQLMGIYNL QQSSQQAEDA  360
LSQGMDALQQ SLSETLANGS PNPSGSSGNV ANYMGQMAMA MGKLGTLAGF LRQADNLRQQ  420
TLQQMLRILT TRQSARALLA ISDYFSRLRA LSSLWLARPR E
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.34850.0cell culture| flower| pod| root
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj1g3v4141650.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1494090.0BT149409.1 Lotus japonicus clone JCVI-FLLj-21E17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493401.10.0transcription factor TGA2.3-like
RefseqXP_012569330.10.0transcription factor TGA2.3-like
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLI3T9L10.0I3T9L1_LOTJA; Uncharacterized protein
STRINGXP_004493401.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-143bZIP family protein