PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0336749.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | CPP | ||||||||
Protein Properties | Length: 137aa MW: 15352.4 Da PI: 6.8684 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 21.4 | 5e-07 | 97 | 134 | 5 | 41 |
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkC.edCkNkee 41 +C C C + +Cf g +C+++C+C ++C N+++ Lj0g3v0336749.1 97 PCLCAGRDCWGTFYKCFTYGFYCGQDCQCgDGCLNTHK 134 7****************************999***975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence Send to blast |
MESENSMQRN IKNEEGEGFR DILNEAVNQG QRTHILKTTE VKLEHKFPGC GIKDIPSKFE 60 EKLPPPDKPR IIVDNPDQST KLVPSTAAAS SKSRPLPCLC AGRDCWGTFY KCFTYGFYCG 120 QDCQCGDGCL NTHKVHE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0336749.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP006354 | 5e-43 | AP006354.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT16F22, TM0349b, complete sequence. |