PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0327669.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | LBD | ||||||||
Protein Properties | Length: 81aa MW: 9364.96 Da PI: 10.2248 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 37.7 | 5.9e-12 | 8 | 41 | 1 | 34 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvh 34 +CaaCk+lrr+ +++Cvlapyf +++p+kfanv Lj0g3v0327669.2 8 PCAACKILRRSSTQNCVLAPYFTEHEPHKFANVD 41 7******************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50891 | 9.476 | 7 | 81 | IPR004883 | Lateral organ boundaries, LOB |
Pfam | PF03195 | 2.2E-10 | 8 | 41 | IPR004883 | Lateral organ boundaries, LOB |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence Send to blast |
MESGRNSPCA ACKILRRSST QNCVLAPYFT EHEPHKFANV DTNAIKMLLE LNLGRKRIKS 60 LQHELLWRKG KDLSVQMREL L |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0327669.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 1e-14 | LOB domain-containing protein 4 |