PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0293819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 22736.5 Da PI: 9.9024 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.3 | 1.4e-07 | 68 | 117 | 14 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R +A+ +R+RK +i+eLe+ +++L ae + ele l ++ l +e+ Lj0g3v0293819.1 68 RHSAQHYRARKVHYIAELERSIQVLHAEGYEVSAELEFLDQQNLILGMEN 117 89*******************************99999999887777766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.0E-4 | 59 | 119 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.05E-5 | 67 | 118 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-6 | 68 | 112 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MRANRIYSTN QSNSCNDVKF PCFVTTQESD AIYEKQNVSD PQGSFVQQHR CLQPNPSSNR 60 TDSKRVKRHS AQHYRARKVH YIAELERSIQ VLHAEGYEVS AELEFLDQQN LILGMENRAL 120 KQRLDSLSQE QFIKSLEQEV LEKEITRLRN LYQQQQQKQQ QKHHSKPRSK HQDLDASFAK 180 LSLKNKGTEL QKAR |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in vascular tissues of leaves, stems and siliques, anthers, filaments, tapetum, mature pollen grains, pistil vascular tissues and papillar cells, and funiculi. {ECO:0000269|PubMed:19449183}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269|PubMed:17719007, ECO:0000269|PubMed:19449183}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0293819.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC125481 | 6e-34 | AC125481.23 Medicago truncatula clone mth2-15n13, complete sequence. | |||
GenBank | CT009492 | 6e-34 | CT009492.5 M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027343063.1 | 2e-82 | uncharacterized protein At4g06598 | ||||
Swissprot | F4IN23 | 2e-21 | BZP34_ARATH; Basic leucine zipper 34 | ||||
TrEMBL | A0A2Z6LVX4 | 1e-55 | A0A2Z6LVX4_TRISU; Uncharacterized protein | ||||
TrEMBL | A0A3Q7YFE9 | 2e-55 | A0A3Q7YFE9_CICAR; uncharacterized protein LOC101493956 | ||||
STRING | AES68260 | 1e-44 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF27174 | 3 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 2e-38 | bZIP family protein |
Publications ? help Back to Top | |||
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