PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0277829.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family EIL
Protein Properties Length: 467aa    MW: 53306.6 Da    PI: 4.5057
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0277829.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3394.51.5e-120303572353
                      XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                       lkkrmwkd++ll+++ke++ q     e+     +++  +e++ +kkmsraQD++LkYM+k+mevcnaqGfvYgiipekgkpv+g+s+sLr+WW
  Lj0g3v0277829.1  30 QLKKRMWKDRILLQKMKEKRDQD----ET-----EQQAKQEASIKKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIIPEKGKPVSGSSESLRGWW 114
                      69************999999883....22.....3345689999************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--T CS
             EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lsk 188
                      ke+++fd+n+p a+sky     +l+++++  ++ ss+ h l+++qD+tlgSLLsalmqhc ppqrrfple+gv+pPWWPtG e wwge+g l++
  Lj0g3v0277829.1 115 KEQIRFDQNAPQALSKYL---PLLENSDN--MDLSSYIHLLQDMQDSTLGSLLSALMQHCIPPQRRFPLERGVSPPWWPTGIEMWWGEQGlLAQ 203
                      *****************3...35554444..478********************************************************999* PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqke 282
                      +qg+ppykkphdlkkawkvsvL+avikhmsp+++++r+l+ qsk lqdkm+a++s+++++v+nqee++++            ++ +++ +e++ 
  Lj0g3v0277829.1 204 EQGPPPYKKPHDLKKAWKVSVLAAVIKHMSPDLDRLRRLVTQSKTLQDKMTARDSATWSRVMNQEEALMR----------LTNKCLKITDEDE- 286
                      ******************************************************************9773..........3566677777755. PP

                      XXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
             EIN3 283 dvegkkesk.ikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                       ++++ es+   +   ++     + ++krk  ++    +s  + ++ c++ ++++se  l+f d+ns+ ++e
  Lj0g3v0277829.1 287 KNQEEGESSgSTDLGLDDGLILGSKHEKRKWVFEFG-EASGGDNIYACHNVECPQSELTLGFVDRNSRIDHE 357
                      455444444034555555544555666666444444.44444567**********************98886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.1E-11430269No hitNo description
Gene3DG3DSA:1.10.3180.106.7E-67144274IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.58E-58147272IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MMVISEEIDP YARGGDTDGD TEAESIDYDQ LKKRMWKDRI LLQKMKEKRD QDETEQQAKQ  60
EASIKKKMSR AQDSVLKYMV KIMEVCNAQG FVYGIIPEKG KPVSGSSESL RGWWKEQIRF  120
DQNAPQALSK YLPLLENSDN MDLSSYIHLL QDMQDSTLGS LLSALMQHCI PPQRRFPLER  180
GVSPPWWPTG IEMWWGEQGL LAQEQGPPPY KKPHDLKKAW KVSVLAAVIK HMSPDLDRLR  240
RLVTQSKTLQ DKMTARDSAT WSRVMNQEEA LMRLTNKCLK ITDEDEKNQE EGESSGSTDL  300
GLDDGLILGS KHEKRKWVFE FGEASGGDNI YACHNVECPQ SELTLGFVDR NSRIDHESHC  360
DYRNDARLLA NLDDWMNMEI VGDEQNDVGE NLNSAGEIDQ GGALIECNTR NWLDCFEDHE  420
LQEALELVQR SVDSTQNPAH SSQGSEEEPS IWDFAYNPVQ DNVFDTQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-591452731128Protein ETHYLENE INSENSITIVE 3
4zds_B6e-591452731128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0277829.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027337569.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-129EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLV7D3300.0V7D330_PHAVU; Uncharacterized protein
STRINGXP_007163637.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-129EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]