PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0250849.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | TALE | ||||||||
Protein Properties | Length: 655aa MW: 71527.6 Da PI: 7.0619 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.4 | 1.4e-09 | 367 | 404 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + Lj0g3v0250849.2 367 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 404 564459******************************88 PP | |||||||
2 | BELL | 120.1 | 1e-38 | 231 | 302 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe+vag+gsa+ Yt+lAl++iS++FrcLkdai++qi Lj0g3v0250849.2 231 ERQEIQMKKAKLINMLDEVEQRYRQYHNQMQVVISMFEQVAGMGSARTYTALALQTISKQFRCLKDAITGQI 302 79*********************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 4.4E-57 | 161 | 300 | IPR006563 | POX domain |
Pfam | PF07526 | 4.0E-46 | 166 | 299 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.195 | 345 | 408 | IPR001356 | Homeobox domain |
SMART | SM00389 | 5.3E-9 | 348 | 412 | IPR001356 | Homeobox domain |
CDD | cd00086 | 8.97E-12 | 348 | 409 | No hit | No description |
SuperFamily | SSF46689 | 7.27E-17 | 349 | 415 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 8.5E-29 | 351 | 414 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 2.7E-18 | 365 | 404 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009610 | Biological Process | response to symbiotic fungus | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010197 | Biological Process | polar nucleus fusion | ||||
GO:0010201 | Biological Process | response to continuous far red light stimulus by the high-irradiance response system | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 655 aa Download sequence Send to blast |
MATYFHTNSE IQGGADGLQT LLLMNPGGYV QYSDTPPPPP PPQQHGGNYM FLNSAAAANS 60 SFVQQGTSHA PQQFVGVPLS AASGEPPGQA PHEVSALHGF PHRMQYNPWN GADQNAAARE 120 ASRASQGLSL SLQSQAPDAD ARVSGGGSSS TASGVTNGGV SGIQSVLFGS KFLKATHELL 180 EEVVNVNGGI KVDSAKKKVV GESSTAGSGD GSVGGDQGSL KRSSELLSTT ERQEIQMKKA 240 KLINMLDEVE QRYRQYHNQM QVVISMFEQV AGMGSARTYT ALALQTISKQ FRCLKDAITG 300 QIRAANKSLG EEDCFGGKIE GSRLKYVDHH LRQQRAIQQL GMMNHNAWRP QRGLPERSVS 360 VLRAWLFEHF LHPYPKDSDK HMLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYVEEMKE 420 NERNESEDKT SKSGEESPAM KIQERGPASE TESKSFNSNQ DVAKNQNTPI VSVSTPSTSP 480 VGGNVRNQSA FSFMQELDGL TQGSPKRTRN HEILMSPNRV SSINMDIKSN ETNNEALSRD 540 GYSFIGNQTN FIGGFGQYPM EEIGRFDAEQ FTPRFSGNGV SLTLGLPHCE TISGTHHQTF 600 IPNQNIPIGR RLDISEPNEF GAMNTSNSHS SAAFESINMQ NPKRFAAQLL PDFVA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 4e-16 | 354 | 412 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 4e-16 | 354 | 412 | 5 | 63 | Homeobox protein Meis2 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Lja.20973 | 0.0 | root |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0250849.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003535815.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_006588872.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_014618534.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_014618535.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_014618536.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_028186139.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_028186140.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_028186141.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_028186142.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Swissprot | Q9SJ56 | 1e-173 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A0K2CTJ9 | 0.0 | A0A0K2CTJ9_SOYBN; Homeodomain/HOMEOBOX transcription factor (Fragment) | ||||
TrEMBL | A0A445IJM4 | 0.0 | A0A445IJM4_GLYSO; BEL1-like homeodomain protein 1 isoform A | ||||
TrEMBL | I1L9K6 | 0.0 | I1L9K6_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA10G10040.2 | 0.0 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-147 | BEL1-like homeodomain 1 |
Publications ? help Back to Top | |||
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