PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0192469.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | NAC | ||||||||
Protein Properties | Length: 190aa MW: 21443.2 Da PI: 4.6697 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 52.6 | 1.5e-16 | 17 | 127 | 1 | 101 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..............kvka.eekewyfFskrdkkyatgkrknratk 79 l pG++F+Ptde lv++yLk++v +++l++ ++i+++d++++ePw Lp k +e++++f+ + + ++ r++ Lj0g3v0192469.1 17 LLPGYKFDPTDEVLVDFYLKRRVFAQPLPF-QIISDFDVFQTEPWGLPGgddvsnlifiladgK--IfNERKCFFYNTMGHGI--ENLDVRVVG 105 579***************************.89***************5588888887765432..13667888888887765..4588999** PP NAM 80 sgyWkatgkdkevlskkgelvg 101 sg W+ k k+v +++++ Lj0g3v0192469.1 106 SGEWRVMEKGKDVPIPQNKKMA 127 *****77776666665444443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-18 | 13 | 124 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 17.13 | 17 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.1E-8 | 19 | 122 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MGDLIMTYED KDGRVRLLPG YKFDPTDEVL VDFYLKRRVF AQPLPFQIIS DFDVFQTEPW 60 GLPGGDDVSN LIFILADGKI FNERKCFFYN TMGHGIENLD VRVVGSGEWR VMEKGKDVPI 120 PQNKKMANWA VYRIFQNEDA KEKATGSNGE ISNGGRNTTS IEVIDFNVKR GSFSNLPQMT 180 PSSSEGTESP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0192469.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027352865.1 | 1e-39 | NAC domain-containing protein 83-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13413 | 11 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 1e-15 | NAC domain containing protein 47 |