PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0170469.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 338aa    MW: 37982.9 Da    PI: 6.6905
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0170469.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.7e-11172230563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      kr++r   NR++A rs +RK  +i eLe kv++L++e ++L  +  +l+    +lk+e+
  Lj0g3v0170469.1 172 KRAKRILANRLSAARSKERKTRYISELEHKVQTLQTETTTLSTQFTKLQMDHIELKNEN 230
                      9*******************************************999998888899887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-14168232IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841170233IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.42E-11172228No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-9172228No hitNo description
PfamPF001701.0E-9172231IPR004827Basic-leucine zipper domain
CDDcd147034.43E-11173245No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MDGKKKDDDL DDLFSAYMNL DNIQNMSFSG VEDKDLDSRT SGSKTVESSD NEVDSHANGK  60
ATAARALGAS SSCSEERREG IKRSSNGDMA PGVRHRRSFS LDSSIGKFHL EDESPKLPPL  120
QNLVGQLSPS NSIDGKTSGI GVEFGNGEFS SDELKKIMEN DKLAEIATSD PKRAKRILAN  180
RLSAARSKER KTRYISELEH KVQTLQTETT TLSTQFTKLQ MDHIELKNEN KEYKLRLQSL  240
EQQSQLKDAL NETLDAEVRR LRRTVAEVGG ENLLSSLMGE QRAINQQMVH LQHQPQGQQR  300
HLQLQNSHSQ EERQTQSQQI QHNNEFQSQR QNGKATAY
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.43440.0pod| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0170469.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1242167e-35AC124216.27 Medicago truncatula clone mth2-34o22, complete sequence.
GenBankAC1743157e-35AC174315.4 Medicago truncatula clone mth2-165c4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019436859.11e-166PREDICTED: uncharacterized protein LOC109343151 isoform X1
RefseqXP_019436860.11e-166PREDICTED: uncharacterized protein LOC109343151 isoform X2
RefseqXP_019436861.11e-166PREDICTED: uncharacterized protein LOC109343151 isoform X3
TrEMBLA0A1J7HP641e-165A0A1J7HP64_LUPAN; Uncharacterized protein
STRINGXP_004499227.11e-161(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.33e-53bZIP family protein