PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0161989.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bZIP | ||||||||
Protein Properties | Length: 179aa MW: 20835.4 Da PI: 8.8743 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.7 | 2.5e-08 | 81 | 126 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ rr+++NRe+ArrsR RK+ +e+L++ + eN++L ++l+ Lj0g3v0161989.1 81 RKRRRMISNRESARRSRVRKQRHLENLRNQLNKCRMENRELNNRLQ 126 5789***********************************9998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-8 | 75 | 126 | No hit | No description |
SMART | SM00338 | 1.6E-8 | 77 | 141 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.243 | 79 | 142 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.45E-9 | 81 | 129 | No hit | No description |
CDD | cd14702 | 2.07E-15 | 82 | 129 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 84 | 99 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence Send to blast |
MLSAILPSDP LLSNPFSAFA GGFTPPWDCH DDPLSDYLKP STEPKPVTSS SGSGGPILTH 60 EKRKPDPDEP DQSAEPVIDE RKRRRMISNR ESARRSRVRK QRHLENLRNQ LNKCRMENRE 120 LNNRLQFILY HLNRVRTENE WLRSERTVLQ ERISEYAQIL VLQQLQPSFS TAWNCNLTE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 61 | 83 | KRKPDPDEPDQSAEPVIDERKRR |
2 | 80 | 84 | RKRRR |
3 | 93 | 99 | RRSRVRK |
4 | 93 | 100 | RRSRVRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Lja.11742 | 1e-107 | root |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0161989.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003608557.1 | 2e-83 | basic leucine zipper 4 | ||||
TrEMBL | G7JF85 | 5e-82 | G7JF85_MEDTR; BZIP transcription factor | ||||
STRING | AES90754 | 9e-83 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 6e-30 | basic leucine-zipper 6 |