PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0151399.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 155aa    MW: 17508.8 Da    PI: 6.8105
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0151399.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.52.9e-24121366128
              NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      +F+Ptd+el++ +L +kv+gk+l+ +  i e d+y +++Pw++ +    + + + k++yfF+k +kk   + r+ r++  g W++ g  k v++
  Lj0g3v0151399.1  12 EFNPTDDELLQLFLYNKVHGKPLPDNANILEYDLYgETNPWEIWEefgdSNSYGGKDLYFFTKLKKKLGASARSVRTIGLGSWESEGAGKIVVA 105
                      6*********************999888*****99568*****742454333367899******************************888888 PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++l g+kk + f   ++ + e  +W mhey+l
  Lj0g3v0151399.1 106 -HNKLLGMKKRFRFE--KSGTIEDGKWNMHEYSL 136
                      .999**********8..45555689*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.2157155IPR003441NAC domain
PfamPF023652.8E-1612136IPR003441NAC domain
SuperFamilySSF1019411.01E-2612141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MTATSSSVSR KEFNPTDDEL LQLFLYNKVH GKPLPDNANI LEYDLYGETN PWEIWEEFGD  60
SNSYGGKDLY FFTKLKKKLG ASARSVRTIG LGSWESEGAG KIVVAHNKLL GMKKRFRFEK  120
SGTIEDGKWN MHEYSLDSSL LTDSSVSALR SIMIQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-161213620140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0151399.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027364303.13e-58NAC domain-containing protein 2-like
TrEMBLG7I6N93e-54G7I6N9_MEDTR; NAC transcription factor-like protein
STRINGAES604234e-55(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-16NAC domain containing protein 32