PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0087799.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bZIP | ||||||||
Protein Properties | Length: 452aa MW: 50274.1 Da PI: 5.7711 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.3 | 9.2e-10 | 166 | 209 | 4 | 47 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 k rr+++NReAAr+sR+RKka++++Le +L++ ++L+k Lj0g3v0087799.2 166 QKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQK 209 6889*************************988888887777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.4E-8 | 157 | 210 | No hit | No description |
SMART | SM00338 | 1.5E-7 | 163 | 226 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.415 | 165 | 209 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.25E-7 | 167 | 210 | No hit | No description |
CDD | cd14708 | 4.89E-21 | 167 | 218 | No hit | No description |
Pfam | PF00170 | 6.6E-7 | 167 | 209 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 170 | 185 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.2E-32 | 250 | 324 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 452 aa Download sequence Send to blast |
MWSRASVDAE FDSQQLPSSN AYFTEGSMID SFRVSDFDQS VGYRIEDAVD LSGNSAFNPV 60 KVSNQTISRV HIGTFDKLPI SLDKSPLTNQ TEQEGLQLQK IQSSNLVTLL SGNTENQEES 120 AMADASPRTD ISTDGDTDDK NQRFDRSSLA VGASDSSDRS KDKTDQKSLR RLAQNREAAR 180 KSRLRKKAYV QQLESSRLKL TQLEQELQKA RQQGIFISNS GDQAHSNSGN GAMAFDVEYA 240 RWLEEQNRLI NELRAAVNSH ASDTELRMIL DGIMAHYDEI FKMKIVAAKA DVFHLLSGMW 300 KTPAERCFLW LGGFRSSELL KLLVNQLEPL TEQQLVGITN LQQSSQQAED ALSQGMEALQ 360 QSLSETLSTG SPGSSGSSGN VANYMGQMAM AMGKLGTLEG FIRQADNLRQ QTLQQIHRIL 420 TTRQSARALL AINDYFSRLR ALSSLWLARP RD |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Lja.7083 | 0.0 | cell culture| floral bud| root |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0087799.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT148940 | 0.0 | BT148940.1 Lotus japonicus clone JCVI-FLLj-21P19 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027354194.1 | 0.0 | transcription factor TGA2.2-like isoform X1 | ||||
Swissprot | Q6IVC2 | 0.0 | TGAL1_ORYSJ; Transcription factor TGAL1 | ||||
TrEMBL | Q93XA1 | 0.0 | Q93XA1_PHAVU; TGA-type basic leucine zipper protein TGA2.1 | ||||
STRING | XP_007133721.1 | 0.0 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 1e-150 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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