PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0050669.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | SAP | ||||||||
Protein Properties | Length: 83aa MW: 9123.7 Da PI: 7.3425 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 60.3 | 3e-19 | 1 | 42 | 40 | 81 |
SAP 40 anevwpePflealatqvaidasrslGrlaaasalanvfqvcs 81 +nevwpeP++e latqva+d+++++Grlaaas+la+vfqv+s Lj0g3v0050669.1 1 MNEVWPEPVVELLATQVATDSAHYHGRLAAASSLAIVFQVTS 42 79**************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence Send to blast |
MNEVWPEPVV ELLATQVATD SAHYHGRLAA ASSLAIVFQV TSLSSPSSSC CIPCYLVSFS 60 IFVFFFFIFV KVRSVVKYLI IGS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0050669.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP008952 | 1e-139 | AP008952.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjT45D07, TM0932b, complete sequence. |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7687 | 31 | 46 |