PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0007479.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bZIP | ||||||||
Protein Properties | Length: 338aa MW: 37982.9 Da PI: 6.6905 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.2 | 2.7e-11 | 172 | 230 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR++A rs +RK +i eLe kv++L++e ++L + +l+ +lk+e+ Lj0g3v0007479.1 172 KRAKRILANRLSAARSKERKTRYISELEHKVQTLQTETTTLSTQFTKLQMDHIELKNEN 230 9*******************************************999998888899887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.3E-14 | 168 | 232 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.841 | 170 | 233 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.42E-11 | 172 | 228 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-9 | 172 | 228 | No hit | No description |
Pfam | PF00170 | 1.0E-9 | 172 | 231 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 4.43E-11 | 173 | 245 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence Send to blast |
MDGKKKDDDL DDLFSAYMNL DNIQNMSFSG VEDKDLDSRT SGSKTVESSD NEVDSHANGK 60 ATAARALGAS SSCSEERREG IKRSSNGDMA PGVRHRRSFS LDSSIGKFHL EDESPKLPPL 120 QNLVGQLSPS NSIDGKTSGI GVEFGNGEFS SDELKKIMEN DKLAEIATSD PKRAKRILAN 180 RLSAARSKER KTRYISELEH KVQTLQTETT TLSTQFTKLQ MDHIELKNEN KEYKLRLQSL 240 EQQSQLKDAL NETLDAEVRR LRRTVAEVGG ENLLSSLMGE QRAINQQMVH LQHQPQGQQR 300 HLQLQNSHSQ EERQTQSQQI QHNNEFQSQR QNGKATAY |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Lja.4344 | 0.0 | pod| root |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0007479.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC124216 | 7e-35 | AC124216.27 Medicago truncatula clone mth2-34o22, complete sequence. | |||
GenBank | AC174315 | 7e-35 | AC174315.4 Medicago truncatula clone mth2-165c4, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019436859.1 | 1e-166 | PREDICTED: uncharacterized protein LOC109343151 isoform X1 | ||||
Refseq | XP_019436860.1 | 1e-166 | PREDICTED: uncharacterized protein LOC109343151 isoform X2 | ||||
Refseq | XP_019436861.1 | 1e-166 | PREDICTED: uncharacterized protein LOC109343151 isoform X3 | ||||
TrEMBL | A0A1J7HP64 | 1e-165 | A0A1J7HP64_LUPAN; Uncharacterized protein | ||||
STRING | XP_004499227.1 | 1e-161 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2272 | 34 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 3e-53 | bZIP family protein |