PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.1556s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 373aa MW: 40154.9 Da PI: 8.1104 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.5 | 1.4e-17 | 54 | 103 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g Kalax.1556s0002.1.p 54 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 103 59*******.**********93....35999**********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 3.4E-32 | 54 | 117 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.1E-11 | 54 | 103 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.115 | 54 | 111 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.0E-29 | 54 | 110 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.6E-21 | 54 | 111 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 8.14E-29 | 54 | 110 | No hit | No description |
PRINTS | PR00367 | 2.1E-9 | 55 | 66 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-9 | 77 | 93 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence Send to blast |
MEDAMRRLNG FTHLPPPPPE TTTTTAKKLP NKRPLKDTTN PSSTAAASNG GAMRYRGVRR 60 RPWGRYAAEI RDPQSKERRW LGTFDTAEEA ACAYDCAARA MRGLKARTNF VYPASPPPHH 120 YAAAAEPYFM SAFHFPKMHS YRSAPSWSAS PAGSGFGLGA ADYIPGYLKP SYNNNNINHR 180 DSMTRPGPGC EIRIPDMSYN AFSTSDSTSV TPGSNASSSM VTTFTGPAVS KALILPATAV 240 SDVDCGFFKK EPPYAGLLEE IIQGFVPLPE LRDPHVNNPD ASIYNSRSLD FPTAASLGRY 300 SLGEDCLVSD FNGLQQQQQS QKVNGVVNGG CYGGNNGLIM NGTTPFGVES YVGELGTSGM 360 MVLDGGFEFQ RS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 6e-19 | 54 | 121 | 14 | 75 | Ethylene-responsive transcription factor ERF096 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 5e-12 | DORNROSCHEN-like |
Link Out ? help Back to Top | |
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Phytozome | Kalax.1556s0002.1.p |