PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.1442s0006.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 407aa MW: 44504.7 Da PI: 5.4993 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.8 | 5.2e-10 | 230 | 277 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq Kalax.1442s0006.2.p 230 SHSLAERVRREKISERMKYLQELVPGC----SKITGKAGMLDEIINYVQSLQ 277 8**************************....899*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.42E-10 | 224 | 281 | No hit | No description |
SuperFamily | SSF47459 | 1.1E-16 | 224 | 295 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.599 | 226 | 276 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.6E-17 | 226 | 294 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.9E-7 | 230 | 277 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.2E-9 | 232 | 282 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 407 aa Download sequence Send to blast |
MMLHCVNTSG GVSGGAELSV LERQRAHMKW QHQQQQGLEY GNVHSVLPGY GGVGNQVQGQ 60 VCGDSGVGQV GFPVVKPETG LDGTWTGFGN YGMPSVEDFM SCGYADNSGA EYSYQMMKNA 120 SCPVEISEGR DSILSGRTNL GDAEGAKKRK AENPASLKAV ADNGIKEKKI KEWAEDGESK 180 ITQPNTSINS KSKNKREASA DASKDNPKAP EVQKTDYIHV RARRGQATDS HSLAERVRRE 240 KISERMKYLQ ELVPGCSKIT GKAGMLDEII NYVQSLQRQV EFLSMKLATV NPQLNFSIES 300 LFGKEVFSPC TSSYPTLGKL SEMANTAYAQ FSHLEEAVSP GLDLGNYQPD MGLQRQLPEI 360 YVDPTSFNQI QQNPSTWDAE LQSLLAMEFQ GRSTSYPTQL FTGEDQ* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007199864.1 | 1e-119 | transcription factor bHLH63 isoform X1 | ||||
Refseq | XP_018851563.1 | 1e-119 | PREDICTED: transcription factor bHLH63-like | ||||
TrEMBL | A0A2I4H5X9 | 1e-118 | A0A2I4H5X9_JUGRE; transcription factor bHLH63-like | ||||
TrEMBL | M5VVW1 | 1e-118 | M5VVW1_PRUPE; Uncharacterized protein | ||||
STRING | EMJ01063 | 1e-119 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 7e-57 | cryptochrome-interacting basic-helix-loop-helix 1 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.1442s0006.2.p |