PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1403s0004.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family SAP
Protein Properties Length: 460aa    MW: 50676.2 Da    PI: 6.6716
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1403s0004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP675.29.2e-20614591455
                  SAP   1 mssssssssseseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsd 90 
                          msss+ssss++ +     + gg+  + ++  psssr+r +n vwpePf+ealatq+ai a+ ++Grlaaa+alan fqvcstwravsrs+
  Kalax.1403s0004.1.p   1 MSSSTSSSSEDTDR---DNGGGG--ERDVVVPSSSRPRFSNAVWPEPFVEALATQLAIHACITFGRLAAAPALANFFQVCSTWRAVSRSE 85 
                          55555554443332...222222..346789*********************************************************** PP

                  SAP  91 llwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvde.....dndadal.sCrclalsdkylaaGfadGavrl 174
                          llw++ltr+iW++ +l r tWr+e+i+rhrta nfrtr+y+++ l+fdp d++      + d+da  +Cr+lalsd +laaGf+dGavrl
  Kalax.1403s0004.1.p  86 LLWHNLTRQIWNVVQLRRPTWRDEFIFRHRTALNFRTRQYAHTILHFDPFDNAAstssaEVDPDARpTCRRLALSDVHLAAGFSDGAVRL 175
                          ************************************************98765411111344554349********************** PP

                  SAP 175 fdletrlhvstflpqhr..drlGrfsravsGivisd..srlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGl 260
                          f+l+trlhv+t++p  r   +lGrfs+avsGivis+  srlvfatldGdihv+++   g ++ rra++Gdvv dGalvdf+G++ WwvG+
  Kalax.1403s0004.1.p 176 FHLQTRLHVTTLRPLVRprLQLGRFSSAVSGIVISNegSRLVFATLDGDIHVTTVMD-GGTPLRRAHAGDVVRDGALVDFTGCDSWWVGI 264
                          **************87611568************974579*************9987.569***************************** PP

                  SAP 261 yaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssl 350
                          +aGvp rafhiW++e+eel fvGG ltdPea+ GWhmlt++telvGr+rv++retavaCtslrl+vfdl nqg++l+e+e rrG++v++l
  Kalax.1403s0004.1.p 265 FAGVPERAFHIWNSESEELLFVGGNLTDPEALIGWHMLTDVTELVGRIRVSSRETAVACTSLRLIVFDLNNQGLILGESEPRRGIVVGAL 354
                          ****************************************************************************************** PP

                  SAP 351 dasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhva 439
                          d + e+y++vd+rG+atvrrv++++evcrf+ rg  qrg+lgC+n+gya ++a+g +rvWe+e+ + yly++ er+g +nal+addrhva
  Kalax.1403s0004.1.p 355 DDAGEVYMTVDTRGTATVRRVDDMTEVCRFNARGvPQRGLLGCINTGYAFLCAAGAIRVWEVERGG-YLYNFWERIGATNALIADDRHVA 443
                          **********************************99***************************966.*********************** PP

                  SAP 440 vsssdgtihlldfgaq 455
                          +s +++tihl+dfgaq
  Kalax.1403s0004.1.p 444 ASCNHSTIHLWDFGAQ 459
                          **************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813831.16E-765116IPR001810F-box domain
Gene3DG3DSA:1.20.1280.508.3E-666133No hitNo description
SuperFamilySSF509986.04E-13149456IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.103.9E-12160239IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.103.9E-12302456IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MSSSTSSSSE DTDRDNGGGG ERDVVVPSSS RPRFSNAVWP EPFVEALATQ LAIHACITFG  60
RLAAAPALAN FFQVCSTWRA VSRSELLWHN LTRQIWNVVQ LRRPTWRDEF IFRHRTALNF  120
RTRQYAHTIL HFDPFDNAAS TSSAEVDPDA RPTCRRLALS DVHLAAGFSD GAVRLFHLQT  180
RLHVTTLRPL VRPRLQLGRF SSAVSGIVIS NEGSRLVFAT LDGDIHVTTV MDGGTPLRRA  240
HAGDVVRDGA LVDFTGCDSW WVGIFAGVPE RAFHIWNSES EELLFVGGNL TDPEALIGWH  300
MLTDVTELVG RIRVSSRETA VACTSLRLIV FDLNNQGLIL GESEPRRGIV VGALDDAGEV  360
YMTVDTRGTA TVRRVDDMTE VCRFNARGVP QRGLLGCINT GYAFLCAAGA IRVWEVERGG  420
YLYNFWERIG ATNALIADDR HVAASCNHST IHLWDFGAQ*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028093942.10.0transcriptional regulator STERILE APETALA
SwissprotQ9FKH11e-167SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A498H9130.0A0A498H913_MALDO; Uncharacterized protein
STRINGXP_009343485.10.0(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-164SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]