PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.1192s0008.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 289aa MW: 32396.9 Da PI: 4.7011 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.1 | 2.8e-15 | 86 | 134 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 ykGVr++k +g+++AeIrd + r +r++lg+f+t eeAa+a+ + +++ Kalax.1192s0008.1.p 86 IYKGVRRRK-WGKFAAEIRDpF-----RkTRVWLGTFDTGEEAAAAYARKEAEYK 134 69****998.**********77.....45******************88777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.18E-16 | 85 | 118 | No hit | No description |
SuperFamily | SSF54171 | 2.29E-16 | 86 | 135 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 9.3E-14 | 86 | 135 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.7E-20 | 86 | 129 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.0E-10 | 86 | 128 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.4 | 86 | 144 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.5E-10 | 87 | 98 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.5E-10 | 109 | 125 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence Send to blast |
MRPPRGKHVP ETIKKLRVIC SDPYATESDS SSGEEDEFTG GRRRPCKRYV QEILIRDDIN 60 KEEPGKPDDQ KPPGEKFQPK GKSSTIYKGV RRRKWGKFAA EIRDPFRKTR VWLGTFDTGE 120 EAAAAYARKE AEYKKLLAEK RSFSVTTCSP FLTPPRTSSS DDTADFCSLA SPSSVLDVTR 180 PAPRPDHCRK TWDPCKEANS FMMEEEELIS AFLKEPALSP ELSSVFDDSK LFESNQYLSG 240 STPDLLASDS STDSGQEADF DSLMDSEFGW GNDDFTWIDE TLNVEPST* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 93 | KGVRRRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61630.1 | 4e-14 | cytokinin response factor 6 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.1192s0008.1.p |