PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kalax.1112s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | STAT | ||||||||
Protein Properties | Length: 701aa MW: 77827.8 Da PI: 6.1301 | ||||||||
Description | STAT family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | STAT | 161.6 | 1.7e-50 | 211 | 331 | 1 | 120 |
STAT 1 ldvvllnalgqp.vekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfei 89 +dvvll+a+g+p ++ d+evvasLlyad+g++ve + daea LL+s+dGvef+s d+ +kl +G+asf lk+sqLsskcdnrLfrikf i Kalax.1112s0002.1.p 211 VDVVLLDAFGHPaMSNDIEVVASLLYADNGAPVETPFDAEAALLTSCDGVEFASGDKLIKLQNGHASFNLKMSQLSSKCDNRLFRIKFFI 300 69********983579************************************************************************** PP STAT 90 pklkkypfleavskpirCisrsrntrssslt 120 p+ +ypf+e++s pir +srsrn+r ++++ Kalax.1112s0002.1.p 301 PNRGSYPFFETYSPPIRSVSRSRNSRILTRI 331 *************************988765 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF49899 | 4.43E-6 | 41 | 163 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
SuperFamily | SSF55550 | 3.73E-9 | 596 | 684 | IPR000980 | SH2 domain |
Gene3D | G3DSA:3.30.505.10 | 2.2E-7 | 601 | 684 | IPR000980 | SH2 domain |
PROSITE profile | PS50001 | 10.701 | 603 | 684 | IPR000980 | SH2 domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 701 aa Download sequence Send to blast |
MASTHARDYC ALKDLTWQID PGAAGFCFWL YLSESTPLPA TLIRQVRPDA ASPLLSLDDR 60 KRPLLWPLLF EHEDSPRSSH TASGEQAQYT AGETEYPLGR WVHVGCEVSS GLLLLHIDGN 120 IVIEKLLSSS DSGSGTLKKV FLHGANDNLV DGYICNMEIL FSTMLIKEQY VKEPPHQLSI 180 DFQCTSDVDE DGEGIWNIVG GKPTGRRTFT VDVVLLDAFG HPAMSNDIEV VASLLYADNG 240 APVETPFDAE AALLTSCDGV EFASGDKLIK LQNGHASFNL KMSQLSSKCD NRLFRIKFFI 300 PNRGSYPFFE TYSPPIRSVS RSRNSRILTR ISKKSSSVVH ANGSQSPRTD DVCLKIPQHA 360 AHGAVAFKPT KRVKCLEGKS SMIIQLHPVP GGSDEEVHSP AKFDSQVTDA SRTLTGEPSR 420 LNETDVSQSD SESTEEESLE SKGMSGSRKH FTDPCVFKYC LGGLEERANI LKELALSASD 480 QDLKEFAQKV SLYSGCSHHW TQIAITRKLI GQGTRFWNMM SQHNEPVCWE NVVFEIRKQF 540 MKIALTTRSL SDQDLSFLRR VSGCQGYVAQ ENFEKMWSWL YPVAYTLSRS GINSLWDSTL 600 PNWIEGFITK EEAELSLQGS RGLQQPGTFI LRFPTSRSWP HPDAGKLVVT YVGSDCTLHH 660 RLISLDHIYS SSGDENANSL QDMILSEPEL SQLGRVIRSQ * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010644056.1 | 0.0 | PREDICTED: uncharacterized protein LOC100260583 isoform X2 | ||||
TrEMBL | A0A251PL13 | 0.0 | A0A251PL13_PRUPE; Uncharacterized protein | ||||
STRING | XP_008226365.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G78540.1 | 1e-167 | SH2 domain protein B |
Link Out ? help Back to Top | |
---|---|
Phytozome | Kalax.1112s0002.1.p |