PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1087s0007.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 311aa    MW: 34363.4 Da    PI: 4.516
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1087s0007.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-1677128155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          s+y+GV +++ +grW+A+I  +     +k+ +lg+f t eeAa+a++ a+ +++g
  Kalax.1087s0007.2.p  77 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFATQEEAAEAYDMAAIEYRG 128
                          89****99**********988422...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.838142IPR001471AP2/ERF domain
SMARTSM003800.008548IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-8944IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.7E-91043IPR001471AP2/ERF domain
CDDcd000181.13E-2477138No hitNo description
SuperFamilySSF541711.24E-1777138IPR016177DNA-binding domain
PfamPF008474.9E-1277128IPR001471AP2/ERF domain
PROSITE profilePS5103218.55878136IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-1878137IPR001471AP2/ERF domain
SMARTSM003804.3E-2778142IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MFPFSLSPAV YLGAYGDEEA AAHAYDLAAL KYWGPQSILN FPLSTYEEEL KGMEDQSREE  60
YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVLG NKYLYLGTFA TQEEAAEAYD  120
MAAIEYRGLN AVTNFDLSRY AKWLSCSHQE PNAHKSDCNL VSHNQLGHHQ AADSSLFTSP  180
AASLSENYTS EDADEAALMN NTTSADQWGR RTQNSKEEEE FYPSYSNTTT TSAAATLSSG  240
EDSDSKSSST VTNKRFFPDD IQTIFECTQQ ESVSGMCAGT TDFIHIGSED MIFGEAELSA  300
YTSSLFDLDQ *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021643102.13e-92AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A0D2Q6I24e-90A0A0D2Q6I2_GOSRA; Uncharacterized protein
TrEMBLA0A1U8JJ904e-90A0A1U8JJ90_GOSHI; AP2-like ethylene-responsive transcription factor At1g16060 isoform X2
TrEMBLA0A1U8JPW64e-90A0A1U8JPW6_GOSHI; AP2-like ethylene-responsive transcription factor At1g16060 isoform X1
STRINGGorai.009G008800.17e-91(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.22e-62ARIA-interacting double AP2 domain protein