PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.1028s0006.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 310aa MW: 33670.8 Da PI: 6.0352 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.8 | 3e-06 | 187 | 230 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 e +rrRR+ i +++ L+ l P++ + ++Le +++YIk+Lq Kalax.1028s0006.1.p 187 ETDRRRRKIIGERLKALQGLAPQS---G--QGHPGDVLEDTIDYIKYLQ 230 679********************9...4..444589************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.633 | 180 | 229 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.83E-9 | 183 | 240 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0042 | 186 | 235 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.2E-8 | 187 | 238 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.11E-5 | 190 | 234 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence Send to blast |
MEEKGSNEDP AQMPSGSVLS GLRTPIAYST SAPNQHCVHS SNAMALRQWM YYPYMPQNCA 60 NVMSGASSSG CQASPYGDNH WKIASSSNPP SIVKSVPQMF SNGGWYGAPT GAANSMVCGK 120 NVWYGMPQLE DELQQKLGSE SSQSQIQDDI STTEGGSRNG VHQANVAILD LVPEQHNKAK 180 KPGSTYETDR RRRKIIGERL KALQGLAPQS GQGHPGDVLE DTIDYIKYLQ LQLKDLSHSR 240 FGGESVSDPL VFIEGYGHYL VHEPMVNEPL DEMMGKLMEV NPQGAAALLE SKGLCIRDMS 300 LAKRLQDPV* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30980.1 | 3e-16 | LJRHL1-like 2 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.1028s0006.1.p |