PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0911s0018.2.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 265aa MW: 28406.3 Da PI: 5.9271

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0911s0018.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.7	3.1e-06	236	261	5	30
HHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 5 hnerErrRRdriNsafeeLrellPka 30 h+++Er RR+ri +++ L+el+P+a Kalax.0911s0018.2.p 236 HSIAERLRRERIAERMKGLQELVPNA 261 99**********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.2E-6	229	262	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.32E-4	229	263	No hit	No description
PROSITE profile	PS50888	10.779	231	264	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.7E-5	236	261	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence Send to blast
MQPQPQCNGS SASPVDDMQH NLNLNSSTAA SPLMKFPLLP SSHHDLQTSS HHFDQMQQSF 60 DHAPPAPDDF LEQMLSTLNS ASAWDLKAAG ESSGSPEESD NGVSASAFQF DEAVAASRLR 120 AQQHHQHMLP LPFGVDNLVD RSRGSLLEGS SFDSYHPGVE NQMAGLFNGS FVGSLLGPGQ 180 QMNLPEQFQS SQQGGPSFEA PAAMNNQAPI SSSGGAAAAP PKQRVRARRG QATDPHSIAE 240 RLRRERIAER MKGLQELVPN ANKF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	245	RLRRER

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018850325.1	3e-40	PREDICTED: transcription factor bHLH66
TrEMBL	A0A2N9G1V1	1e-39	A0A2N9G1V1_FAGSY; Uncharacterized protein
STRING	VIT_11s0037g00040.t01	3e-38	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	2e-09	LJRHL1-like 3

Link Out ? help Back to Top
Phytozome	Kalax.0911s0018.2.p