PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0866s0005.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family CAMTA
Protein Properties Length: 572aa    MW: 64077.5 Da    PI: 7.1597
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0866s0005.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1181.31.2e-56211372118
                 CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 
                          l+ ++rwl++ ei++iL+n++++++  e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+e+n
  Kalax.0866s0005.2.p  21 LEAQHRWLRPAEICEILQNYKSFRICPEPADQPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEDN 110
                          5679************************************************************************************** PP

                 CG-1  92 ptfqrrcywlLeeelekivlvhylevk 118
                          ++fqrr+yw+Lee+l++ivlvhy++vk
  Kalax.0866s0005.2.p 111 ENFQRRSYWMLEEALSHIVLVHYRDVK 137
                          ************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143782.90116142IPR005559CG-1 DNA-binding domain
SMARTSM010761.5E-7919137IPR005559CG-1 DNA-binding domain
PfamPF038594.1E-5022136IPR005559CG-1 DNA-binding domain
PfamPF006120.0017393411IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.309393420IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
MDSSSRRHVL GNQLDIEQIL LEAQHRWLRP AEICEILQNY KSFRICPEPA DQPPSGSLFL  60
FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL HCYYAHGEDN ENFQRRSYWM  120
LEEALSHIVL VHYRDVKGNR TSISRTRENV ESSITVQEAG DNLSESEISN SASSNMQRSS  180
YQNPSPTTDT SLSSMHASQY EDAESAYNDQ NMCGLHSFLE MRQPANGNLV GPSNTYYTIS  240
NGAAAGALTD PTPKYTSGRT AADLAAQNGH KGIAGYLAEA ALAAHLQSLD LKDPVAGDVV  300
DELGAKAVQA VAVRDANPIS DSHIPETVSL RYSIAAVCNA TQAAARITQV FRAQSFQRKQ  360
IQEYEEDEHS SHGAALSQIA LKQQNAFYGG PVAAATRIQK NYRSYKGRKE FLIIRQRIVK  420
LQKAHVRGHQ VRKNYGKIIW SVGIVEKVIM RWRRKGSGLR GYKPKGQIEG ATSNTSSSTE  480
DDFDFLKEGR KQTEDRLQKA LARVKSMVQY PEARDQYRRL LNVVSEIQET KGVYDQAHTQ  540
PDEMADSDDD LIDLEALLEA DDMDTLTMAE F*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds calmodulin in a calcium-dependent manner in vitro (PubMed:11925432). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Involved in freezing tolerance (PubMed:19270186). Involved in freezing tolerance in association with CAMTA2 and CAMTA3. Contributes together with CAMTA2 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved in drought stress responses by regulating several drought-responsive genes (PubMed:23547968). Involved in auxin signaling and responses to abiotic stresses (PubMed:20383645). Activates the expression of the V-PPase proton pump AVP1 in pollen (PubMed:14581622). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:11925432, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:19270186, ECO:0000269|PubMed:20383645, ECO:0000269|PubMed:23547968, ECO:0000269|PubMed:23581962, ECO:0000305|PubMed:11925432}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by UVB, wounding, ethylene and methyl jasmonate (PubMed:12218065). Induced by salt stress and heat shock (PubMed:12218065, PubMed:20383645). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:20383645, ECO:0000269|PubMed:25627216}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010645223.11e-133PREDICTED: calmodulin-binding transcription activator 3 isoform X3
SwissprotQ9FY746e-96CMTA1_ARATH; Calmodulin-binding transcription activator 1
TrEMBLF6HWM21e-128F6HWM2_VITVI; Uncharacterized protein
STRINGVIT_07s0141g00250.t011e-129(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-87Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains