PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0854s0009.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 261aa MW: 29166.8 Da PI: 7.1657 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.3 | 7.5e-33 | 10 | 64 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFvea+++LGG++kAtPk++++lmk++gLtl+h+kSHLQk+Rl Kalax.0854s0009.1.p 10 KPRLKWTPELHSRFVEAIAKLGGPDKATPKSVMKLMKIPGLTLYHLKSHLQKFRL 64 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.449 | 7 | 67 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 4.1E-30 | 8 | 67 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.97E-16 | 9 | 65 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.8E-23 | 10 | 65 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.6E-8 | 12 | 62 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.2E-20 | 103 | 148 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MGLILSTDAK PRLKWTPELH SRFVEAIAKL GGPDKATPKS VMKLMKIPGL TLYHLKSHLQ 60 KFRLGKSQLS ETCPDSRPED RGQIHFDQDD HGASLKQINE NFKIAQALQL QMEVQTQLHT 120 QIEVQRRLQL RIEAQGKYLQ SVLKKAQESL AGYKNTSQCE LSELVSMVNS SCQNSSALSD 180 LTETESCRLR DLAKGLARCA RSSDASPTSS SSPAQEQQDS LNHQLNTLNS EYEDQQTAKR 240 PRLSLQLSLD LNSEYEDQSD * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 7e-21 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-21 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-21 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-21 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-21 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-21 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-21 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-21 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021890537.1 | 2e-85 | myb family transcription factor PHL8-like isoform X3 | ||||
Swissprot | F4I274 | 1e-62 | PHL8_ARATH; Myb family transcription factor PHL8 | ||||
TrEMBL | A0A2I4DJV4 | 7e-82 | A0A2I4DJV4_JUGRE; myb family transcription factor PHL8-like | ||||
STRING | XP_010108678.1 | 1e-81 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69580.1 | 1e-64 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0854s0009.1.p |
Publications ? help Back to Top | |||
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