PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0827s0016.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 188aa    MW: 20885 Da    PI: 10.8698
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0827s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.6e-1994143154
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                          s y+GVr++k +g+W+AeIrd +     r +r++lg+f t+eeA +a+ a  +++e
  Kalax.0827s0016.1.p  94 SVYRGVRQRK-WGKWAAEIRDpF-----RsARVWLGTFNTPEEASQAYQAKLREYE 143
                          78*******9.**********66.....56********************999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381232.4E-295182IPR017392AP2/ERF transcription factor ERF/PTI6
PfamPF008474.5E-1294143IPR001471AP2/ERF domain
CDDcd000183.72E-2094135No hitNo description
SuperFamilySSF541714.58E-1794142IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.7E-2295142IPR001471AP2/ERF domain
PROSITE profilePS5103219.28295153IPR001471AP2/ERF domain
SMARTSM003802.6E-1595155IPR001471AP2/ERF domain
PRINTSPR003671.3E-1096107IPR001471AP2/ERF domain
PRINTSPR003671.3E-10118134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MSVGAGSVRK VRVIYSDPYA TESSSDEEDN ATGVARVAEI RKRVVKEIVI PVVGMKRKAR  60
GSGLVKKESG VGDGLLHAER KSMNMTQSLS KMPSVYRGVR QRKWGKWAAE IRDPFRSARV  120
WLGTFNTPEE ASQAYQAKLR EYEALGATDS ATPKKIKTGF KKTILKAKKD VSEMKNESTL  180
LPSHRRSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023885153.14e-37ethylene-responsive transcription factor ERF119-like
TrEMBLA0A2N9G6T81e-35A0A2N9G6T8_FAGSY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-29ERF family protein