PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0826s0005.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 466aa    MW: 50647.1 Da    PI: 6.686
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0826s0005.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.89.5e-083333721453
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                          +e+A rs +RK  +i eLe kv++L+++ ++L  ++ +l+
  Kalax.0826s0005.1.p 333 TESAARSKERKMRYISELEHKVQTLQSQTTTLSAQVTQLQ 372
                          69******************************99998885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0039319390IPR004827Basic-leucine zipper domain
CDDcd147039.60E-15328372No hitNo description
SuperFamilySSF579598.44E-7333372No hitNo description
PfamPF077161.0E-4333372IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-8334373No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MGDTERASND AMQRLQSSFG ASSCLNLKQP LASSQQLDVN HMSISHSDAP VRHFAQHFGV  60
ESGKRVGMPP SHPGQFPPIS PYSQLPAARQ PPQALSFQNF GQGSSHSRSL SQPSFINLDS  120
LPPLSPSPYR ESSDQFSRDV TMGEKEAGSQ NVLASSSFMG VNYGFHAGES LPPRKTHRRS  180
NSDSSAFGFS AMMESSLSLR PLDGSIPAQH NRNFGVTNPG LVKSEFLWNA DGYKNAEGMG  240
ERKSEGEVID ELFSTYMNLE SVETMNSSGS NDKLGNGHHE SHHGGDTSDN ETEGSINESG  300
NAIATKGASD VIVKKEGMKR SATQDIARPL ATTESAARSK ERKMRYISEL EHKVQTLQSQ  360
TTTLSAQVTQ LQVSLSIAAR SAALTSQNNE LRFRLQAMEQ QAKLRDVLPP LNETLHGEVQ  420
RLKLTTQQLG LNPRSSKDPA NSQMLQIADP KQQENIPIAK EEVTD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012084427.17e-94transcription factor RF2a
TrEMBLA0A438I9E81e-117A0A438I9E8_VITVI; Putative transcription factor PosF21
STRINGXP_002513009.16e-90(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.33e-46bZIP family protein