PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0821s0010.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 453aa    MW: 50159.2 Da    PI: 4.5039
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0821s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573117.86.2e-37137236198
               DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 
                          klfqrlw++eDei lLqG++d+ +++g+s+ +  d+ +fy+++k++++++++k+qlveK+rrLKkK+++  ++++ gke++f+++hdq +
  Kalax.0821s0010.1.p 137 KLFQRLWTDEDEIGLLQGFLDYSTQRGTSQNNphDTAQFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLARVSLGKEVQFKSPHDQAT 226
                          579*************************555446******************************************************** PP

               DUF573  89 felskkiWgs 98 
                          fe++ kiWg+
  Kalax.0821s0010.1.p 227 FEIATKIWGT 236
                          ********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.4E-34139235IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MASEENQRAP IAAVKIGNSN DEEADEIDEE DGETEETEEE EEEDDGDGGM AGDHDCGVGR  60
AAAEEDEDVE IGAEEEEEDR NVSLSSDPAR SAVTVAVPPP SIAIVPAKRP RIVEDEALGE  120
PIGERRVSQV GDDQARKLFQ RLWTDEDEIG LLQGFLDYST QRGTSQNNPH DTAQFYDQIK  180
SKLQLDFNKN QLVEKLRRLK KKYRNVLARV SLGKEVQFKS PHDQATFEIA TKIWGTPQNP  240
HNSKDQQHQH QQMRGVDVDD DMPPNFNPAS ANLNLNDASN FNNFNSRGGY SNHHHHSDLM  300
AADERKSQPE QQKAKKRIRV KMEDSRSLMD QKGSAVAALA SNLSPAQNPI WQPVLGLSTP  360
SLVEETVKNK ISPLMYERYG GSGVGGSGVL GDGIVSPVPL SFASPVNLFG TEVLDGRWRK  420
QQILELEVYS KRLELVQEQI KLTLEQLRST GS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.14e-60DNA-binding storekeeper protein-related transcriptional regulator