PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0817s0009.3.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TALE
Protein Properties Length: 622aa    MW: 68540.4 Da    PI: 6.4036
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0817s0009.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.74.6e-094314681954
                          HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                          Fe   ++yp+++e+  LA+++gLt  qV +WF N R +
  Kalax.0817s0009.3.p 431 FEHflHPYPKESEKVMLARQTGLTRGQVANWFINARVR 468
                          664559******************************88 PP
2BELL123.77.3e-40295365272
                 BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                          rqelq+kk+kL+s+leeVd+r++qy++q+++++ssF+ vag g+akpYt+lAl++iSrhFrcL+dai++qi
  Kalax.0817s0009.3.p 295 RQELQNKKSKLMSMLEEVDRRFSQYYHQMHVIVSSFDLVAGSGAAKPYTKLALQTISRHFRCLRDAIVGQI 365
                          79********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.6E-49219363IPR006563POX domain
PfamPF075261.5E-47225362IPR006563POX domain
PROSITE profilePS5007112.212409472IPR001356Homeobox domain
SMARTSM003891.2E-8412476IPR001356Homeobox domain
CDDcd000867.90E-12412473No hitNo description
SuperFamilySSF466892.52E-17413479IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-27415478IPR009057Homeodomain-like
PfamPF059209.8E-17429468IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 622 aa     Download sequence    Send to blast
MAIYYPSSTD QRDASATPFL QEPPSSTSYN ELSIPPGNMM MYINQGAPSS SYMEFMSEHS  60
LSQHDCVDMA TVPGGGNGLM NIPSSGAVSI PSVALQTSSA TGNPYSDSVD EASRKIPGMQ  120
LNMLNGDQNV HTQGLSLSLS TEIQSGMAAS SHYQYSSSGL DSFSHLPMSA QGATSSNYLQ  180
LPAEFSADYG HIFKHEVLYS PQLSMGHKQN QYDPNMYNSF HTKTICDSRF LKAAQQLLDE  240
VVSVQDALKK PEMDKNRTPH QTVGDISKEG GQKSSENATT GQNEASSNEL MLTVRQELQN  300
KKSKLMSMLE EVDRRFSQYY HQMHVIVSSF DLVAGSGAAK PYTKLALQTI SRHFRCLRDA  360
IVGQIQVTRR SLGEQDTSPN LLGGGIPRLR YVDQQIRQQR GLHQLGVSRH SWRPQRGLPE  420
SSVTILRAWL FEHFLHPYPK ESEKVMLARQ TGLTRGQVAN WFINARVRLW KPMVEEMYKE  480
EFGESETISM SSPDRCLSNA PKSVSSWASI DAADEELQRN LMSLASAGSH PHKFSESTSK  540
PDFAASVEST GPLADFFRNR SHGDDDLGFG LMKFEGDRRH NALDHGLYHS EISSLNQDGD  600
GNSLAQDSQV SLGLGVTGTR P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A1e-16418475158Homeobox protein Meis1
4xrs_B1e-16418475158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023903260.11e-158BEL1-like homeodomain protein 7 isoform X1
RefseqXP_023903261.11e-158BEL1-like homeodomain protein 7 isoform X1
RefseqXP_023903262.11e-158BEL1-like homeodomain protein 7 isoform X1
TrEMBLA0A2N9IHG61e-174A0A2N9IHG6_FAGSY; Uncharacterized protein
STRINGVIT_18s0001g13150.t011e-160(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-115BEL1-like homeodomain 7