PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0807s0018.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 321aa MW: 35435.2 Da PI: 4.6676

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0807s0018.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	62	1e-19	139	197	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++W+K Gq k+s+f rsY++C+++ +C ++k v++++e p+ +++tY+g H h+ Kalax.0807s0018.1.p 139 EDVWAWKKNGQNFTKDSPFLRSYFKCSTSdECFARKMVQQTSEVPEKFIVTYTGLHVHP 197 8***********************9998**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	6.9E-20	128	199	IPR003657	WRKY domain
PROSITE profile	PS50811	21.85	133	199	IPR003657	WRKY domain
SuperFamily	SSF118290	4.32E-18	136	199	IPR003657	WRKY domain
SMART	SM00774	8.1E-18	138	198	IPR003657	WRKY domain
Pfam	PF03106	3.3E-17	139	197	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MDHFNYDVPA KIGSSSSSNF SPGERCPFSV SDPTSIFLNV ETEIPFSYPE LDSIFDPQDA 60 ADKFDVFAPP IMKPCTTPSS DITTTTAATA VAAPSPCPKV EKSRARSPSF EEIYKQKLKK 120 RSSKKISSVH EVGDGKQIED VWAWKKNGQN FTKDSPFLRS YFKCSTSDEC FARKMVQQTS 180 EVPEKFIVTY TGLHVHPPPN TENPIRGCYK PLRAKRSMKG GGGSNNASSS SSTLTNQTND 240 NAALTPISSD HYHSSANTTF SEMMMMFSSE GEVTEEARDD EVEELGEDLF LHDDVNGDAS 300 LGDDEFFEGI EELHKKFFCD *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23550.1	8e-19	WRKY family protein

Link Out ? help Back to Top
Phytozome	Kalax.0807s0018.1.p