PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0785s0004.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 557aa MW: 59442.6 Da PI: 8.2046 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.3 | 1.2e-11 | 425 | 484 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ +a l+s + Kalax.0785s0004.1.p 425 PKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTSLN 484 59************************************************9999998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.4E-18 | 422 | 486 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.909 | 424 | 487 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-11 | 426 | 482 | No hit | No description |
Pfam | PF00170 | 8.9E-10 | 426 | 483 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.81E-11 | 426 | 477 | No hit | No description |
CDD | cd14703 | 1.11E-25 | 427 | 478 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence Send to blast |
MGDTEEAHMD MMHRIQSSFG TSSSALPRQH SPSDVPHLSP AHMRAPMRHF GSFGADSGKR 60 VGIPPSHPHQ IPPVSPYSLI PVSRPPGQQP GSQAHAHAHA QGKSHSSHSR SLSQPALFSF 120 DSLPPLSPSP YRDSSSGSSH GHQVSGDVNM EDREASPHLL LPPSPYGGSA NRLGEGLPPR 180 KAHRRSNSDI TFGFNPLQSP IGPLRGPNTL ERSTSGGDKF GGSNSTPVQL VKREFSWNGG 240 EGTGERKSEG EVIDDLFSAY LNLDNIDTLN SSEADEKNGF GSREDHVSGA SGTNTVGSSD 300 NEAESSAIGN NGNNDSAMSK LALSGGVVQK KEGMKRSAAG DIAPTTRHYR SVSMDSFMGG 360 MHFGDESPKL SPSPGPAPGQ LSPGSSLDKN SNSFSLEFGN GEFSGAELKK IMANDKLAEI 420 AAADPKRAKR ILANRQSAAR SKERKMRYIS ELEHKVQTLQ TEATTLSAQL TLLQRDSAGL 480 TSLNNELKFR LQAMEQQAQL RDALNEALSA EVQRLKITSQ ELRGETPSSS KGVSAPQHSL 540 NQQMSQKSQN VTTKNQ* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023883422.1 | 0.0 | transcription factor RF2a | ||||
TrEMBL | A0A2R6RBR6 | 0.0 | A0A2R6RBR6_ACTCH; Transcription factor RF2a like | ||||
STRING | VIT_03s0038g00860.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-121 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0785s0004.1.p |