PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0784s0005.2.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 757aa MW: 82459 Da PI: 5.6562

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0784s0005.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.5	6.1e-08	8	52	17	61
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 A r+R++ ++e +L+ + k+++aeN++L +e+e+l+k+v+ l Kalax.0784s0005.2.p 8 ACRCREKQRKESSRLQAENKKFTAENRMLVEENERLQKQVSHLSY 52 669*************************************98865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	9.1E-5	8	50	No hit	No description
CDD	cd14686	2.58E-7	8	48	No hit	No description
PROSITE profile	PS50848	23.06	92	311	IPR002913	START domain
SMART	SM00234	4.9E-33	101	311	IPR002913	START domain
SuperFamily	SSF55961	8.52E-27	102	313	No hit	No description
Pfam	PF01852	1.6E-42	102	309	IPR002913	START domain
Gene3D	G3DSA:3.30.530.20	7.6E-17	140	277	IPR023393	START-like domain
Pfam	PF08670	2.9E-45	611	755	IPR013978	MEKHLA

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0008289	Molecular Function	lipid binding

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence Send to blast
MLSGFGMACR CREKQRKESS RLQAENKKFT AENRMLVEEN ERLQKQVSHL SYDNGFMRQK 60 LRSRSATTDA SCEFVVTPHS QQNPTHQPRE RDANSPAGLL AIAEETQAEF LSKATGIAVN 120 WIQMVGMKPG PDSVGIVAVS RNCAGVAARA CGLVSLEPMK VAEILKDTPA WFRDCRTHNV 180 LTVLPTANGG TLELIYMQTY APTTMASARD FWKLRFISPI EDGGLVVCER SLNASTGGST 240 GPSSPNFIRA EVFPSGFLIR PCEGGGSIIH IVDHLDLDPC SAPEILRPLY ESSEIIAQKI 300 SFAALRHIRQ IAQENCGEIK YGGGKQPAVL RTFSQRLSRG FNDAVNGLVD DGWSLLDSVE 360 MDDVTISINM SASKFIDSQS NSAALFPAFG GGVLCAKASM LLEDVAPAHL VRFIREHRSE 420 WADYGIDAYW AASVRASPSA IPCSTPSALR SNQVILPLAH TIELEELCSG IDENEVGPCA 480 QIVFAPIDES FADDALLLPS GFRVISLENK ADEPGATRTL DLASVLEVHT TGALAAGDSG 540 ANHFKQRAVL TMAFQFTFEN HLRDSVASMA RQYVRSVVGA VQRVAVVLSP ARLGSQMVVE 600 NSFPGSTEVI TLARWITQSY KIHTGKELVR VCSQAGDSVL KLLWQFSEAV MCCSLTTNAP 660 PVFTFANQSG LDMLETTFGS LQDIKLEKTL DEAGRKSLLA EFPKITQQGF AYLPAGNCMS 720 SMGRPISYNQ AIAWIVLDDE EVNHCLAFMF VNWSFM*

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence Send to blast

MLSGFGMACR CREKQRKESS RLQAENKKFT AENRMLVEEN ERLQKQVSHL SYDNGFMRQK  60
LRSRSATTDA SCEFVVTPHS QQNPTHQPRE RDANSPAGLL AIAEETQAEF LSKATGIAVN  120
WIQMVGMKPG PDSVGIVAVS RNCAGVAARA CGLVSLEPMK VAEILKDTPA WFRDCRTHNV  180
LTVLPTANGG TLELIYMQTY APTTMASARD FWKLRFISPI EDGGLVVCER SLNASTGGST  240
GPSSPNFIRA EVFPSGFLIR PCEGGGSIIH IVDHLDLDPC SAPEILRPLY ESSEIIAQKI  300
SFAALRHIRQ IAQENCGEIK YGGGKQPAVL RTFSQRLSRG FNDAVNGLVD DGWSLLDSVE  360
MDDVTISINM SASKFIDSQS NSAALFPAFG GGVLCAKASM LLEDVAPAHL VRFIREHRSE  420
WADYGIDAYW AASVRASPSA IPCSTPSALR SNQVILPLAH TIELEELCSG IDENEVGPCA  480
QIVFAPIDES FADDALLLPS GFRVISLENK ADEPGATRTL DLASVLEVHT TGALAAGDSG  540
ANHFKQRAVL TMAFQFTFEN HLRDSVASMA RQYVRSVVGA VQRVAVVLSP ARLGSQMVVE  600
NSFPGSTEVI TLARWITQSY KIHTGKELVR VCSQAGDSVL KLLWQFSEAV MCCSLTTNAP  660
PVFTFANQSG LDMLETTFGS LQDIKLEKTL DEAGRKSLLA EFPKITQQGF AYLPAGNCMS  720
SMGRPISYNQ AIAWIVLDDE EVNHCLAFMF VNWSFM*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002281868.2	0.0	PREDICTED: homeobox-leucine zipper protein HOX32
Swissprot	Q6AST1	0.0	HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBL	A0A2N9J8X2	0.0	A0A2N9J8X2_FAGSY; Uncharacterized protein
TrEMBL	A0A438IPB2	0.0	A0A438IPB2_VITVI; Homeobox-leucine zipper protein HOX32
TrEMBL	A5AMZ1	0.0	A5AMZ1_VITVI; Uncharacterized protein
STRING	VIT_10s0003g04670.t01	0.0	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34710.1	0.0	HD-ZIP family protein

Link Out ? help Back to Top
Phytozome	Kalax.0784s0005.2.p

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Itoh J,Hibara K,Sato Y,Nagato Y Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice. Plant Physiol., 2008. 147(4): p. 1960-75 [PMID:18567825] Li YY, et al. Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice. Rice (N Y), 2016. 9(1): p. 46 [PMID:27624698]