PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0756s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 274aa MW: 30500.5 Da PI: 5.6185 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 105.8 | 2.4e-33 | 6 | 63 | 3 | 60 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 e al+cprCds+ntkfCyynnys sqPr++C++C+ryWt+GG+lrnvP Gg + k+++ Kalax.0756s0002.1.p 6 EGALACPRCDSRNTKFCYYNNYSKSQPRHYCRSCKRYWTAGGSLRNVPTGGRTVKKRR 63 56789**********************************************9999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-21 | 6 | 63 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 5.9E-30 | 8 | 62 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 27.009 | 9 | 63 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 11 | 47 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence Send to blast |
MEREEEGALA CPRCDSRNTK FCYYNNYSKS QPRHYCRSCK RYWTAGGSLR NVPTGGRTVK 60 KRRGHTSSRS KNMTSHTSKR SGSFNGSTRF AIVISGDALG KKIDTQLVDQ QKAESFGRIS 120 PGFDQKDESS GGVSTAFDQK DESFGGVSPG SDQKDESFGG VSPGSDQKDV TDIPYMNHGL 180 SECYDVLLTD EIGEGVMACS SYQSLFDHEV FSFELPDLTN TGKNGDEYQQ HQWQWQLPST 240 SDIVGKEMRW EDHLHDSLCV TDFLTMDEPQ LSK* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 1e-28 | DOF zinc finger protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0756s0002.1.p |