PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0726s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GRF | ||||||||
Protein Properties | Length: 289aa MW: 32651.5 Da PI: 10.3619 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.1 | 1.7e-24 | 209 | 253 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrC+RtDGKkWRC +++++ +k+CE+Hlhrgr+rsrk +++ Kalax.0726s0010.1.p 209 DPEPGRCKRTDGKKWRCAKEAMPEYKYCEKHLHRGRHRSRKLVDP 253 79***************************************9987 PP | |||||||
2 | QLQ | 36.5 | 1.5e-13 | 143 | 177 | 3 | 37 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT +Q q+L++Q+ +++y+ a+++vP Ll +i+k Kalax.0726s0010.1.p 143 FTFMQRQELEQQACIFRYIEAGAQVPYPLLYPIWK 177 9********************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51666 | 17.026 | 142 | 177 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
Pfam | PF08880 | 6.3E-9 | 143 | 176 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51667 | 24.773 | 209 | 253 | IPR014977 | WRC domain |
Pfam | PF08879 | 3.5E-20 | 210 | 251 | IPR014977 | WRC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence Send to blast |
MAVSPRESGE ERETEMGPAQ GVTLEGPAKR QRQLKSLLYP IKTNKSELRN RVFRAFHQFP 60 RTHTLIQISP PRISKKMVDS ATQVSRLPDG AETGIDLGLE LGLGSNFEAE MRKYKERVVV 120 VLDNEEDDDD RRRKKRVRVP MGFTFMQRQE LEQQACIFRY IEAGAQVPYP LLYPIWKSVA 180 GSADRCRLPF IPNLFAGPVG LSWKQGRSDP EPGRCKRTDG KKWRCAKEAM PEYKYCEKHL 240 HRGRHRSRKL VDPSSATGLP PPPPSQTKAP HFPAPERIGL SIALPSGQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 130 | 135 | RRRKKR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | VIT_02s0025g04910.t01 | 1e-36 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37740.1 | 1e-29 | growth-regulating factor 2 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0726s0010.1.p |