PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0720s0019.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | CAMTA | ||||||||
Protein Properties | Length: 924aa MW: 104641 Da PI: 6.6234 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 156.9 | 4.2e-49 | 28 | 142 | 4 | 117 |
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 e k+rwl+++ei+aiL n+ + ++ ++ + pksg++ L++rkk+r+frkDG++wkkk dgktv+E+he+LK+g+ e +++yYah+++n+ Kalax.0720s0019.1.p 28 EaKSRWLRPNEIHAILFNHVYFPIHVKPVNLPKSGEIHLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKIGNEERIHVYYAHGQDNA 117 559*************************************************************************************** PP CG-1 93 tfqrrcywlLeeelekivlvhylev 117 tf rrcywlL++++e+ivlvhy+e+ Kalax.0720s0019.1.p 118 TFVRRCYWLLDKSMEHIVLVHYRET 142 **********************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 71.851 | 22 | 148 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 6.8E-70 | 25 | 143 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 3.3E-44 | 28 | 141 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 5.2E-6 | 370 | 459 | IPR013783 | Immunoglobulin-like fold |
SuperFamily | SSF81296 | 4.9E-15 | 372 | 459 | IPR014756 | Immunoglobulin E-set |
CDD | cd00603 | 1.70E-4 | 372 | 459 | No hit | No description |
Pfam | PF01833 | 3.6E-7 | 372 | 458 | IPR002909 | IPT domain |
CDD | cd00204 | 1.38E-17 | 531 | 667 | No hit | No description |
Pfam | PF12796 | 3.2E-8 | 550 | 637 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 1.71E-17 | 552 | 668 | IPR020683 | Ankyrin repeat-containing domain |
Gene3D | G3DSA:1.25.40.20 | 4.3E-17 | 566 | 669 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 16.52 | 575 | 667 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 3.5E-6 | 608 | 637 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 11.728 | 608 | 640 | IPR002110 | Ankyrin repeat |
SuperFamily | SSF52540 | 2.66E-7 | 730 | 822 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
PROSITE profile | PS50096 | 6.504 | 756 | 782 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 38 | 771 | 793 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.071 | 772 | 801 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.063 | 774 | 792 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.0017 | 794 | 816 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.908 | 795 | 819 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 3.6E-4 | 798 | 816 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 7 | 876 | 898 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.517 | 878 | 906 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.084 | 879 | 898 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 924 aa Download sequence Send to blast |
MESVLLDGFQ IHGFRTMNEL DLKSIFEEAK SRWLRPNEIH AILFNHVYFP IHVKPVNLPK 60 SGEIHLFDRK KLRNFRKDGH NWKKKNDGKT VKEAHEHLKI GNEERIHVYY AHGQDNATFV 120 RRCYWLLDKS MEHIVLVHYR ETCELLDPSA APVNSNSSSG LTELHVPFLT YEETESGSQQ 180 SNTSNQLEYI ESIENVTAVT LERRLREINT LDWDELLVDT DPSVPIAYEE GKSGGFQQQN 240 PVMINVSKDD GSALLMNLPT ELSSGWHSAC PETRSDSING DILDGSYNHA VHSQLMMEAA 300 PNNSGTLFGG QSFSITQGGG QDQDRRWMNS SLTVESPGSV NDSIHESSIS SAQNSMVPTI 360 MDQPQSADQI FTITDISPEW AFSCEKTKIL LTGYFHQGFG NLLNSNLYCV CGSSCVPVEI 420 VQTGVMRCIL PPHSPGQFDL YLSTERLKPV SQLKTFEYRS SLQADQNIPS DNLSDWDEFR 480 NKMRLVRLLF SSSKTLNILS AKVSEHTVNE AKKFSEKTSH TASSWALLKQ SVDENKISLH 540 QAEEILFEQA IRNRLQDWLL ERIIEEQSPS DYDEQGLGVL HLCAILNYTW AVYLYSKSGL 600 SLDFRDKYGW TALHWAAYYG REDIVGALLS AGARPNLVTD PTPLIPGGCT ASDLAAQKGH 660 NGLAAYLGEE ALVDHFNDMA LAGNASGSIE FQRTCSVKRE TVYDEASCLK DTLAAYRTAA 720 DAAARINAAF REQSLKLRTE AVQGSNPEDE ARTIISAMKI QHAFRSFESR KKMAAALRIQ 780 YGFRTWKTRR DFLNMRQQAI KIQAVFRGFQ VRRHYRKIIW SVGVLEKAVL RWRFKRRGFR 840 GLQVAPVQEI TSVAQEQEND VEEDFFVLGR KQAEDRVESA VIKVQAMFRS KQAQQEYRRM 900 KLAHNQAKIE YEGFFNHNAK MES* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 69 | 84 | KKLRNFRKDGHNWKKK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator (PubMed:14581622). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in response to cold. Contributes together with CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:28351986, ECO:0000305|PubMed:11925432}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, wounding, abscisic acid, H(2)O(2) and salicylic acid. {ECO:0000269|PubMed:12218065}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002272118.2 | 0.0 | PREDICTED: calmodulin-binding transcription activator 6 isoform X1 | ||||
Swissprot | O23463 | 0.0 | CMTA5_ARATH; Calmodulin-binding transcription activator 5 | ||||
TrEMBL | A0A1R3GK40 | 0.0 | A0A1R3GK40_9ROSI; IQ motif, EF-hand binding site | ||||
STRING | VIT_05s0077g01240.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16150.1 | 0.0 | calmodulin binding;transcription regulators |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0720s0019.1.p |
Publications ? help Back to Top | |||
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