PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0712s0008.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 313aa MW: 34300.2 Da PI: 8.7132 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 119.1 | 1.6e-37 | 79 | 137 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e+ lkcprC s+ntkfCyynnys sqPryfCk+CrryWt+GGalrnvPvGgg+r+nk+ Kalax.0712s0008.1.p 79 ETVLKCPRCASMNTKFCYYNNYSHSQPRYFCKTCRRYWTQGGALRNVPVGGGCRRNKRY 137 6779****************************************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-32 | 62 | 136 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 8.5E-33 | 80 | 136 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.938 | 82 | 136 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 84 | 120 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence Send to blast |
MIFSSMPNYN LNPTPNWNHQ QVNHQQLGSS AEDPHPQPPH TPMVPNSPPP QQPAIHYQGT 60 IRPGSMTDRA RMANMPIPET VLKCPRCASM NTKFCYYNNY SHSQPRYFCK TCRRYWTQGG 120 ALRNVPVGGG CRRNKRYCSK VGGGGSSGTA RSKSPAHSGS TPSNSIGYSS GDLIRHGSHI 180 HPQVSFMAPL NLHFSDYSAE DIGVSYPGMI PRVSSSADHF NLLTGNGNTA TSSSDIDPWT 240 FIHQHQLAQV YHHPSSFGGN LEAPLTETQS LYGVEGHVNA SQPNKHKLPC TTADTQLDLL 300 KLERHINNNS DI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02460.1 | 5e-42 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0712s0008.1.p |