PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0707s0011.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 272aa MW: 30284.2 Da PI: 7.2529 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 32.8 | 1.8e-10 | 22 | 91 | 2 | 71 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 Wt l+L++ +e + ++ + ++W+ +s+++++ ++r+ qC+ kw++l +y +ik++e+++ Kalax.0707s0011.1.p 22 WTLTDSLTLVNEIAAVEAECLDALSYYQKWKIISDNCAALEVNRTLDQCRRKWDSLFAEYDRIKRWEGGG 91 788888888888888888888888999****************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.504 | 22 | 78 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 1.5E-8 | 45 | 94 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009506 | Cellular Component | plasmodesma |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence Send to blast |
MPPKKKEESA SRRTRSQVAP GWTLTDSLTL VNEIAAVEAE CLDALSYYQK WKIISDNCAA 60 LEVNRTLDQC RRKWDSLFAE YDRIKRWEGG GNAYWGLARE RRRAVGLPDD FDRDLFNAVD 120 VVVKAQVERA SSRPDAVLED ADADPLGVIS PPVFKKQSHQ LTPQKRQVEV KKEKKVADDR 180 QTGSADVMAT QPGEKDGSVE VTATQLREKA ELIQAILEGK LAENKDYTLG DLKQGPSSRI 240 NLARRQGDKL IDCFGLIAST LDQLCKATHT Q* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 1e-56 | sequence-specific DNA binding transcription factors |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0707s0011.1.p |