PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0695s0014.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 420aa MW: 46723.9 Da PI: 9.0905 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.9 | 4e-32 | 237 | 290 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Kalax.0695s0014.1.p 237 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 290 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.0E-28 | 234 | 290 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.4E-15 | 235 | 290 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.0E-23 | 237 | 290 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.5E-7 | 238 | 289 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence Send to blast |
MELFPAQPDL SLLISPPSST TKPNHTALLW PHTSRSSDHE QVVDEEDQEQ NSDLGFWNRA 60 LNNNNPSTIL SKQQTGPNPV PSNISFSNPS IRASSSSSPK SSNITYFPHH QLLHTSPLPN 120 PNNLHHQATM IAQNQEQLGY MNMKPIRGIP IYHQNSAHRR HPFTASTFPH QHQSLLLNSI 180 PSLPSSISNT NSCSSINGSL ASPAYCFQSS HNQNYHNGFV RSRFLSRFPG KKNTRAPRMR 240 WTSTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKTTDRAAAT 300 SDAYENGSSG DNSEDMMLDI QSSARKQSDQ LHQQSISSAA GRPNAQQDKD CQALWSNSSS 360 REARLHAGKP KDSYQGTIAS LQDMDDSRCL SFYERSSEEI IIGRIMKKPN LEFTLGRAL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 9e-17 | 238 | 292 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 9e-17 | 238 | 292 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-16 | 238 | 292 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-16 | 238 | 292 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-16 | 238 | 292 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-16 | 238 | 292 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 9e-17 | 238 | 292 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 9e-17 | 238 | 292 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 9e-17 | 238 | 292 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 9e-17 | 238 | 292 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 9e-17 | 238 | 292 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 9e-17 | 238 | 292 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018852244.1 | 1e-102 | PREDICTED: probable transcription factor KAN2 isoform X4 | ||||
TrEMBL | A0A2I4H7X1 | 1e-100 | A0A2I4H7X1_JUGRE; probable transcription factor KAN2 isoform X4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32240.1 | 3e-61 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0695s0014.1.p |