PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0693s0012.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 248aa MW: 26769.3 Da PI: 8.6191 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 52 | 1.6e-16 | 7 | 36 | 26 | 55 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPkti+++m+vkgLtl+h+kSHLQkYRl Kalax.0693s0012.5.p 7 EATPKTIMRTMGVKGLTLYHLKSHLQKYRL 36 7****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
TIGRFAMs | TIGR01557 | 3.1E-10 | 6 | 37 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 9.5E-6 | 7 | 37 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.7E-15 | 7 | 37 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 2.0E-26 | 80 | 126 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence Send to blast |
MFSYIAEATP KTIMRTMGVK GLTLYHLKSH LQKYRLGKQA GKESTENSKE ASCMAENQDT 60 GSSASPSSRV IAQEINDSYQ VTEALRLQMD VQRRLHEQLE VQRRLQLRIE AQGKYLQAIL 120 EKACKAFNDQ AAAAAGLEAA REELSGLAIK VSHDSQGLAP LDDLKMPSLS DITTTFASNS 180 QTAPNFPARL GDCSIDSCLT STGSPASPAG LTAQTASLKR RRRPMTGNGE SFPFPSMQAV 240 GWMPNSG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 217 | 223 | LKRRRRP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015574106.1 | 1e-119 | protein PHR1-LIKE 3 isoform X2 | ||||
Swissprot | Q94A57 | 5e-89 | PHL2_ARATH; Protein PHR1-LIKE 2 | ||||
TrEMBL | U5GS23 | 1e-117 | U5GS23_POPTR; Uncharacterized protein | ||||
STRING | XP_006420903.1 | 1e-117 | (Citrus clementina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 3e-79 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0693s0012.5.p |
Publications ? help Back to Top | |||
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