PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0677s0015.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 276aa MW: 30921.2 Da PI: 6.7061 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 105.8 | 2.3e-33 | 22 | 81 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e al+cprCds+ntkfCyynnys sqPr++C++C+ryWt+GG+lrnvP Gg + k+++s+ Kalax.0677s0015.1.p 22 EGALACPRCDSRNTKFCYYNNYSKSQPRHYCRSCKRYWTAGGSLRNVPSGGRTVKKRRSH 81 56789**********************************************999999875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-21 | 22 | 72 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.3E-29 | 24 | 79 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 26.962 | 25 | 79 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 27 | 63 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence Send to blast |
MLSRGSRWRL ALGFKGMERE EEGALACPRC DSRNTKFCYY NNYSKSQPRH YCRSCKRYWT 60 AGGSLRNVPS GGRTVKKRRS HTSSRSKSMT SHTSRRSGSS RFAIVISGEA LGKKIDTQLE 120 DQQKDESFGG ISPGFDQKDE SLGGVSAGSD QKDESFGGVS PGSDQKDVTD IIYKNHGLSE 180 CYDVLLTDEI GEGVMACSSY QSLFDHEVFS FELPEVSDLI NPGKNGVEYH QQHQWQWQLP 240 STSDIVGKEM RWEDQFHDSL CVTDFLTMDV PQFSK* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 76 | 80 | KRRSH |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28810.2 | 6e-26 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0677s0015.1.p |