PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0647s0009.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 392aa    MW: 43226 Da    PI: 8.8379
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0647s0009.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.13.6e-32243296255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Kalax.0647s0009.2.p 243 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 296
                          9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.33E-15240296IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-28241296IPR009057Homeodomain-like
TIGRFAMsTIGR015579.3E-24243296IPR006447Myb domain, plants
PfamPF002496.8E-7244295IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MELFPAQPDL SLQISPPSTT KPNHTALWPH TSRSSDQERV ADEEEDQEQS AMDLGFWNRA  60
LSNNDPSTTL SKQQTGPNPA PFNLSLSNPS IRVSSSSSPK SSNITFPHHH LLHTSSLPNP  120
NNLRHQATIV ATQNQQQQRG YMSMEPIKGI PIYHQNPARH HHPFTASTFP HQHPSLLLDS  180
FPASLPSSIT NTNSSSNIIN GGSQTCSPAA SCCQSSHHQT HHHGFLRTRF LSRFPGKKNM  240
RAPRMRWTST LHARFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKTT  300
DKVAASSDAY ENGSSGDNSE DFMLDIHSSA RKQSDRQDQP SIASAAGGPN ALQDKNFQAL  360
WSNSLSREAW LHAGKQKDSL QGAMVSLQVY I*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-16244298458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-16244298458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-16244298458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-16244298458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-16244298458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-16244298458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-16244298458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-16244298458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015898005.13e-90probable transcription factor KAN2 isoform X3
TrEMBLA0A0B2PB801e-87A0A0B2PB80_GLYSO; Putative transcription factor KAN2
STRINGevm.model.supercontig_208.138e-88(Carica papaya)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.12e-56G2-like family protein