PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0635s0007.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 23429 Da PI: 4.6561 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.5 | 6.8e-18 | 38 | 88 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ r rWv+e+r+p +k++r++lg+f t e+Aa+a++ a+++l+g Kalax.0635s0007.1.p 38 PVYRGVRRRN-RDRWVCEVREP---NKKTRIWLGTFPTLEMAARAHDVAALALRG 88 68*****887.8******9998...347*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.7E-14 | 38 | 88 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.3E-26 | 39 | 102 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.733 | 39 | 96 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 9.7E-31 | 39 | 98 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-21 | 39 | 98 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 2.8E-7 | 40 | 51 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.27E-21 | 51 | 98 | No hit | No description |
PRINTS | PR00367 | 2.8E-7 | 62 | 78 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MDASASSNDD VSSSAPLLAA SNPKRRAGRK KFTETRHPVY RGVRRRNRDR WVCEVREPNK 60 KTRIWLGTFP TLEMAARAHD VAALALRGSR ACLNFADSAW RLPVPGSLDA GEIRRAAVEA 120 AEMFRPGTAS FDDGAGSSGS YGGDDDFDDV AIISSDGGSA IGGGGVFELD VEYFLGVNSR 180 ELMVEMAEGL MVAPPPYWEA EGGGQGESDD VSLWGYSF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid- and dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By high-salt stress, drought stress and abscisic acid (ABA) treatment. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858875.1 | 1e-70 | PREDICTED: dehydration-responsive element-binding protein 1C-like | ||||
Swissprot | Q9FJ93 | 4e-61 | DRE1D_ARATH; Dehydration-responsive element-binding protein 1D | ||||
TrEMBL | A0A022PVI8 | 3e-69 | A0A022PVI8_ERYGU; Uncharacterized protein | ||||
STRING | Migut.F01149.1.p | 6e-70 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 2e-26 | C-repeat/DRE binding factor 2 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0635s0007.1.p |
Publications ? help Back to Top | |||
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