PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0572s0004.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 292aa    MW: 31662.5 Da    PI: 7.8963
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0572s0004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.21.5e-12210254448
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                           +++rr++kNRe+A rsR+RK++++ eLee v +Le+e+ +L  e
  Kalax.0572s0004.1.p 210 QQKQRRMIKNRESAARSRERKQQYTNELEEQVMQLEEERAQLMRE 254
                          689************************************998533 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-9207271IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.208209254IPR004827Basic-leucine zipper domain
PfamPF001704.9E-10209257IPR004827Basic-leucine zipper domain
CDDcd147075.29E-17211252No hitNo description
SuperFamilySSF579599.38E-10212254No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-12212256No hitNo description
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MASSRVMSSS TTTNSDLPPP PAHPPSSQRA QFPSIGVQID HSRNAPPDTM DDILKNINIY  60
VDAPLSPDLE FGNGDAAGGF MDKTTPSDAA VANDVWKEMV AGTGQIVGGG GMTLEEYLSK  120
TTPAVGGGGG MGNGNAEAVR VGVFGGGGLE AQSAGMVNGG GGAGGQFQLS HHHAVPAGQQ  180
RVVMMDGRVA GGMRGKRKVV EEPVVDKATQ QKQRRMIKNR ESAARSRERK QQYTNELEEQ  240
VMQLEEERAQ LMREEVEERN RRRRWLFENI IPVEEKQRQP RRLRRTASME W*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223231ARSRERKQQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.11e-19G-box binding factor 4