PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0531s0018.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 433aa MW: 48517.3 Da PI: 8.5356 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.9 | 4.2e-32 | 249 | 302 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Kalax.0531s0018.1.p 249 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 302 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.51E-15 | 246 | 302 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.8E-28 | 247 | 302 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-23 | 249 | 302 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.8E-7 | 250 | 301 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis | ||||
GO:0048481 | Biological Process | plant ovule development | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence Send to blast |
MELFPAQQPD LSLQISPPNT TTKPTSPWPR RTSSAAEEED HHSMDLQGFW KRALDNNNSA 60 TMAAKPNKNS NTKSSSDHYS DILSLSNPSR SIDNPFEPHH HHSLNNNPLI QHNNPFHQIH 120 HHFQSNPQNQ HHHHHHHQAA AAASFLGHHE QLSFLKPIRG IPIYQSPNFN PNNSTNFLHH 180 HQQQQSVLDG LSYLPSSAAS RAANTSYFMN NNINGGGTVS PCTNNNILLR SSSSRFLSRF 240 PGKRSMRAPR MRWTSTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY 300 RTVKTTDRAA ASSDAYENGS SGDNSEDLML DITNPIKKGD HQTWGQQGRT STSNQDRENY 360 HGLWSNSSSR EAWLHGRPKD SLVGNHINFI EEMDPKPLSY NERLGEVSSL SEGYSSSNSV 420 KPNLEFTLGR SH* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 3e-16 | 250 | 304 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-16 | 250 | 304 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-16 | 250 | 304 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-16 | 250 | 304 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-16 | 250 | 304 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-16 | 250 | 304 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-16 | 250 | 304 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-16 | 250 | 304 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00174 | DAP | Transfer from AT1G32240 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015898005.1 | 1e-116 | probable transcription factor KAN2 isoform X3 | ||||
TrEMBL | A0A067KUB8 | 1e-112 | A0A067KUB8_JATCU; Uncharacterized protein | ||||
STRING | XP_006471518.1 | 1e-108 | (Citrus sinensis) | ||||
STRING | XP_006432742.1 | 1e-108 | (Citrus clementina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32240.1 | 3e-61 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0531s0018.1.p |