PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0509s0021.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 262aa MW: 28623.7 Da PI: 9.8102 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.4 | 2.1e-30 | 93 | 148 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r+ W+++LH rF++ ++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Kalax.0509s0021.2.p 93 KQRRSWSQDLHWRFLHSLQQLGGADVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 148 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.555 | 90 | 150 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.52E-16 | 91 | 151 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.5E-26 | 91 | 151 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.8E-25 | 93 | 148 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence Send to blast |
MDESSEKSWH KSDWLRSVQL WNQSPDPPPK SEELSGEGLV AKKAKRSDNG EETKSVEEIH 60 GQTNGSSTSE TKEPQKSGGG KKEDREGSLS RRKQRRSWSQ DLHWRFLHSL QQLGGADVAT 120 PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPAPPPSQAS GSGAHAPQFV VVGGVWAPPS 180 DYTTMALPVP ANSEGDRASG APRSGMYTPM AAQPNHPCQQ FEFNQKPQVK SKNSESRGDG 240 PARCISLSMS SATRSGPSPV Y* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008339698.2 | 2e-61 | transcription factor HHO3-like | ||||
Refseq | XP_009356299.1 | 2e-61 | PREDICTED: myb family transcription factor EFM-like | ||||
Swissprot | Q9FPE8 | 8e-51 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A498HLS2 | 6e-60 | A0A498HLS2_MALDO; Uncharacterized protein | ||||
STRING | XP_009356299.1 | 8e-61 | (Pyrus x bretschneideri) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 9e-48 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0509s0021.2.p |
Publications ? help Back to Top | |||
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