PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0506s0014.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 307aa MW: 34014.8 Da PI: 4.7609 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.5 | 1.2e-16 | 92 | 139 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 ykGVr++k +g+++AeIrd + r +r++lg+f+taeeAa a+ + +++ Kalax.0506s0014.3.p 92 YKGVRRRK-WGKFAAEIRDpF-----RkTRVWLGTFDTAEEAADAYRRKEIEYK 139 9****998.**********77.....45******************99888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 18.439 | 91 | 149 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.5E-21 | 91 | 137 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.4E-15 | 91 | 140 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.05E-16 | 91 | 140 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 4.7E-10 | 92 | 103 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 9.77E-21 | 92 | 131 | No hit | No description |
Pfam | PF00847 | 8.3E-11 | 92 | 137 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.7E-10 | 114 | 130 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence Send to blast |
MRSPRRDMDG FESVQKVRIF CNDPYATESD SSSDEEDHLV GDRMRPGKRY VQEILIRGDG 60 KSERNKQNEI AQRSGGFRLA ESSRKGKSST MYKGVRRRKW GKFAAEIRDP FRKTRVWLGT 120 FDTAEEAADA YRRKEIEYKK LVAEKRSLLV KTCSAFVTPP GPSSSDDTAD FCSLHSPSSV 180 LDVTGAAGRQ DRRSTGPDHR VKEESSFMME EEVLISTFLK EPIFSAELSS VFDDSKLFMC 240 ESDQYLNGSS SGLLAADGVT DSGADADLDL ALDAGFGWAS DEFAWIDETL NIEPSTLLCI 300 NGDSTA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 98 | KGVRRRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61630.1 | 9e-24 | cytokinin response factor 6 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0506s0014.3.p |