PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0506s0014.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 307aa    MW: 34014.8 Da    PI: 4.7609
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0506s0014.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-1692139354
                  AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                          ykGVr++k +g+++AeIrd +     r +r++lg+f+taeeAa a+ +   +++
  Kalax.0506s0014.2.p  92 YKGVRRRK-WGKFAAEIRDpF-----RkTRVWLGTFDTAEEAADAYRRKEIEYK 139
                          9****998.**********77.....45******************99888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.43991149IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-2191137IPR001471AP2/ERF domain
SMARTSM003804.4E-1591140IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-1691140IPR016177DNA-binding domain
PRINTSPR003674.7E-1092103IPR001471AP2/ERF domain
CDDcd000189.77E-2192131No hitNo description
PfamPF008478.3E-1192137IPR001471AP2/ERF domain
PRINTSPR003674.7E-10114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MRSPRRDMDG FESVQKVRIF CNDPYATESD SSSDEEDHLV GDRMRPGKRY VQEILIRGDG  60
KSERNKQNEI AQRSGGFRLA ESSRKGKSST MYKGVRRRKW GKFAAEIRDP FRKTRVWLGT  120
FDTAEEAADA YRRKEIEYKK LVAEKRSLLV KTCSAFVTPP GPSSSDDTAD FCSLHSPSSV  180
LDVTGAAGRQ DRRSTGPDHR VKEESSFMME EEVLISTFLK EPIFSAELSS VFDDSKLFMC  240
ESDQYLNGSS SGLLAADGVT DSGADADLDL ALDAGFGWAS DEFAWIDETL NIEPSTLLCI  300
NGDSTA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19298KGVRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.19e-24cytokinin response factor 6