PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kalax.0498s0004.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 558aa MW: 62114.1 Da PI: 5.4804 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 75.9 | 5.4e-24 | 132 | 185 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+++ W++eLH++F++ ++ + G ++A+Pk+ile+m+v+gLt+e+++SHLQkYR+ Kalax.0498s0004.2.p 132 KQKVAWSTELHNKFLDSLKII-GLDRAVPKKILEVMNVPGLTRENIASHLQKYRI 185 799******************.********************************6 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50110 | 13.664 | 1 | 39 | IPR001789 | Signal transduction response regulator, receiver domain |
Gene3D | G3DSA:3.40.50.2300 | 1.8E-7 | 1 | 64 | No hit | No description |
SuperFamily | SSF52172 | 5.14E-6 | 1 | 54 | IPR011006 | CheY-like superfamily |
PROSITE profile | PS51294 | 10.119 | 129 | 188 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.06E-17 | 130 | 189 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.6E-23 | 131 | 189 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.8E-22 | 132 | 185 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 558 aa Download sequence Send to blast |
MSADDKEQTM VKGLECGAVY FMRKPVRQDD LKNVWQYAIP KRRHEASSQI VIEDSRVLGS 60 NSSSSEQDQA GAANSVRIPT HGHTPSNADT TSRSVPDKYY EEVVPKRKLT NSKRKVKSSN 120 SGQGHSNNLV KKQKVAWSTE LHNKFLDSLK IIGLDRAVPK KILEVMNVPG LTRENIASHL 180 QKYRIFLKRV ADVTETPDGM GLSMGNRVYR SNLSYSQLYY GFQLEHLEIT DENLLRKMLK 240 QELRAIRDPL YRGPSSRYQG PPTLSGTMRT PFKSIYSSFA FEPRDYLNKQ MPIIFGERLM 300 GADSYRLTSL GSNEIMQQAA APAPAPAPAQ SSELVQFGMY TTGSRLHTSG LVNDIEAQGG 360 TIDMGTSYDM ETENGQMMPQ VTYCNAAMRQ LENGPTQQVL LQPDVHDSIS DLSTSNLDIS 420 GFQGDFSGFL VNQLNGGDDT FNYLEEAGND VVGYPYIGYG SNYSAHDNQD KNQESAPILN 480 QQFGDGLSLI QTSHGDYPYF DDDFFPWSDH EPFQSQPGDQ NANMLMVDER DASGCHEEVA 540 GPLVNGSSKW SNHLRTE* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 4e-20 | 131 | 191 | 4 | 64 | ARR10-B |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G16857.1 | 9e-34 | response regulator 1 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Kalax.0498s0004.2.p |