PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0474s0021.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 424aa    MW: 47815.2 Da    PI: 4.655
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0474s0021.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573113.41.4e-35130228197
               DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 
                          klfqrlw++eDei lLqG++++ + +g s+++  d+  fye++k++++++++k+qlveK+rrLK+K+k+  ++++ gk++sf+++hdq +
  Kalax.0474s0021.1.p 130 KLFQRLWTDEDEIELLQGFLEYMTLRGISYHNhhDLGLFYEQIKSKLQLDFNKNQLVEKLRRLKRKYKNALSRTSAGKDISFKTPHDQAT 219
                          579*************************766545999***************************************************** PP

               DUF573  89 felskkiWg 97 
                          +e+s+kiW 
  Kalax.0474s0021.1.p 220 YEISRKIWS 228
                          ********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.8E-32132228IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MSSKEIEKPI FNDDDLDESD EDSEEEEDNL NRNLTPPPPR DLNDLLDDEE DDDVIDPGNV  60
NDEDDGFNSD PSLVTVAVPP PPQLDDSKAF SAKSDQKNPL LNPLQQQQQL YAVQEDKKVQ  120
QQQHLDDSRK LFQRLWTDED EIELLQGFLE YMTLRGISYH NHHDLGLFYE QIKSKLQLDF  180
NKNQLVEKLR RLKRKYKNAL SRTSAGKDIS FKTPHDQATY EISRKIWSDL SSSKYGAAAT  240
NDEDTHPVLP IPLPNLTPSP NYNFFNPTNN PPLHYAHMNG VHDESQSQST KKRSRVKIEE  300
HRASDERIMM PDMGQGPGSS VALGPGIQGL IEETVKTYLS PLINEALHKG ANGLCATRGF  360
GGVGVLSPLA LNFASPSCFL GGEMSDKKWR KQQILELEVY SQRLELVQEH IKLALEELRS  420
GKS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015875499.11e-86probable transcription factor At3g04930
RefseqXP_024926809.11e-86probable transcription factor At3g04930
RefseqXP_024926811.11e-86probable transcription factor At3g04930
STRINGXP_010090273.13e-85(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.17e-70DNA-binding storekeeper protein-related transcriptional regulator